Neisseria gonorrhoeae FC498 |
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Putative Neisseria gonorrhoeae FC498 RM systems
Ref: Lee,K. et al. unpublished
REBASE ref # 27884
Complete sequence: 2,216,138 bp
GenBank #: AP018385
REBASE acronym: Ngo498
Org_num: 32229
All begin NgFC498_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 402 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 403 | M | M.NgoSH240ORFMP (100% identity) | M.Ngo498ORF403P | |
| 404 | DNA-damage-inducible protein D | |||
| 405 | S | S1.NgoWLORF428P (100% identity) | S1.Ngo498ORF403P | |
| 406 | S | S2.NgoWSII (100% identity) | S2.Ngo498ORF403P | |
| 407 | R | NgoSH240ORFMP (100% identity) | Ngo498ORF403P | |
| 408 | ATP-dependent protease ATP-binding protein | |||
| 703 | recombination factor protein RarA | |||
| 704 | R | NgoSH240ORFBP (100% identity) | GAGNNNNNTAC | Ngo498ORF709P |
| 705 | DNA-binding protein | |||
| 706 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo498ORF709P |
| 707 | Uncharacterised protein | |||
| 708 | Uncharacterised protein | |||
| 709 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo498ORF709P |
| 710 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | leucyl-tRNA synthetase | |||
| 7 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo498ORF7P |
| 8 | modification methylase DpnIIB | |||
| 7 | type II restriction endonuclease | |||
| 8 | M | M.NgoWSORF8P (100% identity) | M.Ngo498ORF8P | |
| 9 | Uncharacterised protein | |||
| 295 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 296 | V | V.NgoWSORF391P (100% identity) | V.Ngo498ORF297P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo498ORF297P | |
| 299 | R | NgoWSORF391P (100% identity) | Ngo498ORF297P | |
| 300 | phenylalanyl-tRNA synthetase subunit beta | |||
| 353 | Transposase and inactivated derivatives | |||
| 354 | R | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo498ORF354P |
| 355 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo498ORF354P |
| 356 | secreted protein | |||
| 360 | uroporphyrinogen decarboxylase | |||
| 361 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo498ORF363P | |
| 362 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo498ORF363P |
| 363 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo498ORF363P |
| 364 | Uncharacterised protein | |||
| 678 | 3-isopropylmalate dehydrogenase | |||
| ??? | R | NgoSH240ORFIP (100% identity) | GGNNCC | Ngo498ORF681P |
| 681 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo498ORF681P |
| 682 | 3-isopropylmalate dehydratase small | |||
| 931 | anthranilate synthase component I | |||
| 932 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo498ORF932P |
| 933 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo498ORF932P |
| 934 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 1195 | phage replication initiation protein | |||
| 1196 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo498ORF1199P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo498ORF1199P | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo498ORF1199P | |
| 1200 | Uncharacterised protein | |||
| 1237 | excinuclease ABC subunit A | |||
| 1238 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo498ORF1239P |
| 1239 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo498ORF1239P |
| 1240 | type I restriction-modification system | |||
| 1877 | integral membrane protein | |||
| ??? | R | NgoPII family restriction endonuclease | GGCC | Ngo498ORF1879P |
| 1879 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo498ORF1879P |
| 1880 | ribosome recycling factor | |||
| 1977 | glutamate permease | |||
| 1978 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo498ORF1979P |
| 1979 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo498ORF1979P |
| 1980 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo498ORF1979P |
| 1981 | restriction endonuclease | |||
| 1980 | cytosine-specific methyltransferase | |||
| 1981 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo498ORF1982P |
| 1982 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo498ORF1982P |
| 1983 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo498ORF1982P |
| 1984 | transcriptional accessory protein Tex | |||
| 2085 | GTPase ObgE | |||
| 2086 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo498ORF2086P |
| 2087 | R | NgoSH240ORFCP (91% identity) | RGCGCY | Ngo498ORF2086P |
| 2088 | protein CysS | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 550 | peptidyl-prolyl cis-trans isomerase A | |||
| 551 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo498ORF551P |
| 552 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo498ORF551P |
| 553 | C32 tRNA thiolase | |||
| 644 | L-lactate dehydrogenase | |||
| 645 | R | NgoSH240ORFJP (100% identity) | Ngo498ORF646P | |
| ??? | M | M.NgoG7944ORFGP (100% identity) | M.Ngo498ORF646P | |
| 648 | tRNA pseudouridine synthase B | |||