Chryseobacterium species H6466 |
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Putative Chryseobacterium species H6466 RM systems
Ref: Nicholson,A.C. et al. unpublished
REBASE ref # 27816
Complete sequence: 3,367,586 bp
GenBank #: CP034160
REBASE acronym: CspH6466
Org_num: 32076
All begin EIB75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6550 | amino acid permease | |||
| 6555 | R | Csp5649ORF10690P (99% identity) | CspH6466ORF6560P | |
| 6560 | M | M.Csp5649ORF10690P (99% identity) | M.CspH6466ORF6560P | |
| 6565 | S | S.Fsp1ORF2250P (45% identity) | S.CspH6466ORF6560P | |
| 6570 | IS4 family transposase | |||
| 9445 | 96 aa hypothetical protein | |||
| 9450 | R | AccIVP (96% identity) | CspH6466ORF9470P | |
| 9455 | 89 aa hypothetical protein | |||
| 9460 | ATP/GTP-binding protein | |||
| 9465 | S | S.CspZHDP1ORF4475P (39% identity) | S.CspH6466ORF9470P | |
| 9470 | M | M.Csp5649ORF8590P (100% identity) | M.CspH6466ORF9470P | |
| 9475 | 213 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 120 | integrase | |||
| 125 | M | M.CspWXORF4145P (90% identity) | M.CspH6466ORF125P | |
| 130 | R | CspWXORF4145P (89% identity) | CspH6466ORF125P | |
| 135 | IS91 family transposase | |||
| 1865 | 314 aa hypothetical protein | |||
| 1870 | M | M.Csp5649ORF825P (100% identity) | M.CspH6466ORF1870P | |
| 1875 | 92 aa hypothetical protein | |||
| 5600 | 68 aa hypothetical protein | |||
| 5605 | RM | Csp5649ORF11665P (99% identity) | CspH6466ORF5605P | |
| 5610 | type I glyceraldehyde-3-phosphate dehydrogenase | |||
| 5735 | 131 aa hypothetical protein | |||
| 5740 | RM | Csp5649ORF11535P (99% identity) | CspH6466ORF5740P | |
| 5745 | 266 aa hypothetical protein | |||
| 6830 | isopentenyl-diphosphate Delta-isomerase | |||
| 6835 | R | Fsp4HI (91% identity) | CspH6466ORF6845P | |
| 6840 | 106 aa hypothetical protein | |||
| 6845 | M | M.Esp427ORF40P (96% identity) | M.CspH6466ORF6845P | |
| 6850 | 16S rRNA | |||
| 7875 | 92 aa hypothetical protein | |||
| 7880 | M | M.Cvi687B0ORF5170P (80% identity) | M.CspH6466ORF7880P | |
| 7885 | 186 aa hypothetical protein | |||
| 7890 | 224 aa hypothetical protein | |||
| 7895 | GHKL domain-containing protein | |||
| 7900 | C | C.Fsp76ORFIP (64% identity) | C.CspH6466ORF7880P | |
| 7905 | 123 aa hypothetical protein | |||
| 8380 | membrane assembly protein AsmA | |||
| 8385 | M | M.Csp5649ORF9350P (99% identity) | M.CspH6466ORF8385P | |
| 8390 | R | Csp5649ORF9350P (100% identity) | CspH6466ORF8385P | |
| 8395 | acyl-CoA dehydrogenase | |||
| 15030 | 3-hydroxybutyryl-CoA dehydrogenase | |||
| 15035 | M | M.Csp5649ORF6025P (92% identity) | M.CspH6466ORF15035P | |
| 15040 | restriction endonuclease | |||
| 15035 | modification methylase | |||
| 15040 | R | FauIVP (95% identity) | CspH6466ORF15045P | |
| 15045 | M | M.Fco81ORF3535P (94% identity) | M.CspH6466ORF15045P | |
| 15050 | 204 aa hypothetical protein | |||
| 15045 | DNA cytosine methyltransferase | |||
| 15050 | R | Csp5649ORF6025P (94% identity) | CspH6466ORF15050P | |
| 15055 | gfo/Idh/MocA family oxidoreductase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10475 | 30S ribosomal protein S1 | |||
| 10480 | R | Csp5649ORF7645P (98% identity) | CspH6466ORF10490P | |
| 10485 | GxxExxY protein | |||
| 10490 | M | M.Cin81895ORF4551P (83% identity) | M.CspH6466ORF10490P | |
| 10495 | DEAD/DEAH box helicase | |||