Salmonella enterica subsp. enterica serovar Virchow FORC_080 |
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Putative Salmonella enterica subsp. enterica serovar Virchow FORC_080 RM systems
Ref: Ko,D. et al. unpublished
REBASE ref # 27472
Complete sequence: 4,828,397 bp
GenBank #: CP025094
REBASE acronym: Sen080
Org_num: 32037
All begin FORC80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 781 | Mobile element protein | |||
| 782 | R | SspZ54ORF5015P (45% identity) | TGANNNNNNCTTC | Sen080ORF783P |
| 783 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Sen080ORF783P |
| 784 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Sen080ORF783P |
| 785 | 540 aa hypothetical protein | |||
| 3909 | 322 aa Hypothetical protein | |||
| 3910 | R | SenUA13ORF1281P (100% identity) | RAACNNNNNNNGTGG | R1.Sen080ORF3911P |
| 3911 | M | M.SenSL491ORF354P (100% identity) | RAACNNNNNNNGTGG | M.Sen080ORF3911P |
| 3912 | S | S.Sen10533ORF19305P (100% identity) | RAACNNNNNNNGTGG | S.Sen080ORF3911P |
| 3913 | 106 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 350 | DamX, an inner membrane protein involved in bile | |||
| 351 | M | Methyl-directed repair DNA adenine methylase | GATC | M.Sen080DamP |
| 352 | Ribulose-phosphate 3-epimerase | |||
| 444 | 54 aa hypothetical protein | |||
| 445 | M | Adenine-specific methyltransferase | ATGCAT | M.Sen080ORF445P |
| 446 | DNA-binding protein Fis | |||
| 708 | Acetyltransferase | |||
| 709 | M | M.SenUA13ORF2340P (100% identity) | M.Sen080ORF709P | |
| 710 | 921 aa hypothetical protein | |||
| 1792 | DNA-cytosine methyltransferase | |||
| 1793 | V | V.StyTDcmP (100% identity) | V.Sen080DcmP | |
| 1794 | Permease of the drug/metabolite transporter | |||
| 2509 | NinF protein | |||
| 2510 | M | M.Sen92021ORF7350P (99% identity) | M.Sen080ORF2510P | |
| 2511 | Phage NinB DNA recombination | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3475 | Cytochrome bd2, subunit I | |||
| 3476 | R | SenZYXORFDP (99% identity) | CAGAG | Sen080ORF3477P |
| 3477 | M | M.SenWT7II (100% identity) | CAGAG | M.Sen080ORF3477P |
| 3478 | metabolite transport protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1791 | metal-dependent phosphohydrolase | |||
| 1792 | M | M.SenST01ORF6245P (100% identity) | CCWGG | M.Sen080ORF1792P |
| 1793 | Very-short-patch mismatch repair endonuclease | |||