Escherichia coli 4/1-1 |
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Putative Escherichia coli 4/1-1 RM systems
Ref: Sandegren,L. unpublished
REBASE ref # 27796
| Sequence length: | GenBank #: | |
| Chromosome: | 5,144,480 bp | CP023844 |
| plasmid p4_1_1.1: | 181,324 bp | CP023845 |
REBASE acronym: Eco411
Org_num: 32032
All begin CRT35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1560 | 52 aa hypothetical protein | |||
| 1565 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco411ORF1570P |
| 1570 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco411ORF1570P |
| 1575 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco411ORF1570P |
| 1580 | 267 aa hypothetical protein | |||
| 26135 | endoribonuclease SymE | |||
| 26140 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Eco411ORF26150P |
| 26145 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.Eco411ORF26150P |
| 26150 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Eco411ORF26150P |
| 26155 | restriction endonuclease | |||
| plasmid p4_1_1.1 | ||||
| 27365 | type II toxin-antitoxin system | |||
| 27370 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNCTGG | M.Eco411ORF27370P |
| 27375 | S | S.KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | S.Eco411ORF27370P |
| 27380 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | Eco411ORF27370P |
| 27385 | glycosyl transferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5255 | 71 aa hypothetical protein | |||
| 5260 | M | M.KpnYN1ORFGP (89% identity) | M.Eco411ORF5260P | |
| 5265 | XRE family transcriptional regulator | |||
| 7660 | TrmB family transcriptional regulator | |||
| 7665 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco411ORF7665P |
| 7680 | 108 aa hypothetical protein | |||
| 11405 | drug/metabolite exporter YedA | |||
| 11410 | V | V.SflC32DcmP (74% identity) | V.Eco411DcmP | |
| 11415 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco411DcmP |
| 11420 | phosphohydrolase | |||
| 19590 | Fis family transcriptional regulator | |||
| 19595 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco411ORF19595P |
| 19600 | transporter | |||
| 20225 | ribulose-phosphate 3-epimerase | |||
| 20230 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco411DamP |
| 20235 | cell division protein DamX | |||
| 25745 | 0 aa hypothetical protein | |||
| 25750 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco411ORF25750P |
| 25755 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco411ORF25750P |
| 25760 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco411ORF25750P |
| 25765 | restriction endonuclease | |||
| 26375 | PerC family transcriptional regulator | |||
| 26380 | M | M.Sso30ORF925P (100% identity) | GATC | M.Eco411ORF26380P |
| 26385 | LexA family transcriptional regulator | |||
| 26410 | 67 aa hypothetical protein | |||
| 26415 | M | M.Sso63633ORF22290P (100% identity) | M.Eco411ORF26415P | |
| 26420 | lysis protein S | |||
| plasmid p4_1_1.1 | ||||
| 27490 | 0 aa hypothetical protein | |||
| 27495 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco411ORF27495P |
| 27500 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25760 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 25765 | R | EcosS9McrCP (100% identity) | Eco411McrCP | |
| 25770 | R | EcosS3McrBP (100% identity) | Eco411McrBP | |
| 25775 | 60 aa hypothetical protein | |||