Shigella flexneri FDAARGOS_535 |
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Putative Shigella flexneri FDAARGOS_535 RM systems
Ref: Goldberg,B. et al. unpublished
REBASE ref # 27754
| Sequence length: | GenBank #: | |
| Chromosome: | 4,586,233 bp | CP034060 |
| plasmid unnamed1: | 217,451 bp | CP034059 |
REBASE acronym: Sfl535
Org_num: 32003
All begin EGX88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23470 | IS3-like element IS2 family transposase | |||
| 23475 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | Sfl535ORF23480P |
| 23480 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.Sfl535ORF23480P |
| 23485 | S | S.SflPE577ORF23095P (100% identity) | GTANNNNNNNNGTCY | S.Sfl535ORF23480P |
| 23490 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4970 | cell division protein DamX | |||
| 4975 | M | M.SflTDamP (100% identity) | GATC | M.Sfl535DamP |
| 4980 | ribulose-phosphate 3-epimerase | |||
| 5525 | DUF2556 domain-containing protein | |||
| 5530 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sfl535ORF5530P |
| 5535 | DNA-binding transcriptional regulator Fis | |||
| 12150 | phosphohydrolase | |||
| 12155 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sfl535DcmP |
| 12160 | V | V.SflTDcmP (100% identity) | V.Sfl535DcmP | |
| 12165 | drug/metabolite exporter YedA | |||
| plasmid unnamed1 | ||||
| 685 | 73 aa hypothetical protein | |||
| 690 | M | M.SflP099ORF24190P (100% identity) | M.Sfl535ORF690P | |
| 695 | 102 aa hypothetical protein | |||