Neisseria gonorrhoeae FQ01 |
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Putative Neisseria gonorrhoeae FQ01 RM systems
Ref: Fouts,D. et al. unpublished
REBASE ref # 27782
Complete sequence: 2,218,440 bp
GenBank #: CP034032
REBASE acronym: NgoFQ01
Org_num: 31972
All begin EGH16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2440 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2445 | M | M.NgoWSII (100% identity) | M.NgoFQ01ORF2445P | |
| 2450 | DNA damage-inducible protein D | |||
| 2455 | S | S.NgoWNII (100% identity) | S.NgoFQ01ORF2445P | |
| 2460 | R | Ngo19853ORF11850P (99% identity) | NgoFQ01ORF2445P | |
| 2465 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5490 | ABC transporter | |||
| 5495 | M | M.Ngo9464ORF4845P (99% identity) | GAGNNNNNTAC | M.NgoFQ01ORF5495P |
| 5500 | 280 aa hypothetical protein | |||
| 5505 | 186 aa hypothetical protein | |||
| 5510 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.NgoFQ01ORF5495P |
| 5515 | hydroxyacid dehydrogenase | |||
| 5520 | R | NgoPID1ORF461P (99% identity) | GAGNNNNNTAC | NgoFQ01ORF5495P |
| 5525 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ01ORF50P |
| ??? | site-specific DNA-methyltransferase | |||
| 50 | restriction endonuclease | |||
| ??? | M | M.NgoCT213ORF40P (95% identity) | M.NgoFQ01ORF55P | |
| 75 | 0 aa hypothetical protein | |||
| 1840 | phenylalanine--tRNA ligase subunit alpha | |||
| 1845 | V | V.NgoWSORF391P (100% identity) | V.NgoFQ01ORF1850P | |
| ??? | M | methylase | M.NgoFQ01ORF1850P | |
| 1855 | 81 aa hypothetical protein | |||
| 1860 | R | Npo18661ORFHP (100% identity) | NgoFQ01ORF1850P | |
| 1865 | phenylalanine--tRNA ligase subunit beta | |||
| 2155 | IS1595 family transposase | |||
| 2160 | M | NgoWOORF381P (100% identity) | GACNNNNNTGA | M.NgoFQ01ORF2160P |
| 2165 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.NgoFQ01ORF2160P |
| 2170 | 0 aa hypothetical protein | |||
| 2200 | DEAD/DEAH box helicase | |||
| 2205 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoFQ01ORF2210P |
| 2210 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoFQ01ORF2210P |
| 2215 | 0 aa hypothetical protein | |||
| 4225 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4230 | R | NgoCT213ORF4320P (100% identity) | GCCGGC | NgoFQ01ORF4235P |
| 4235 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoFQ01ORF4235P |
| 4240 | anthranilate synthase component I | |||
| 5630 | 3-isopropylmalate dehydratase small subunit | |||
| 5635 | M | M.NmeMBW2ORFJP (99% identity) | GGNNCC | M.NgoFQ01ORF5635P |
| 5640 | R | Ngo1035ORF1270P (100% identity) | GGNNCC | NgoFQ01ORF5635P |
| 5645 | 3-isopropylmalate dehydrogenase | |||
| 7180 | excinuclease ABC subunit UvrA | |||
| 7185 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoFQ01ORF7190P |
| 7190 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoFQ01ORF7190P |
| 7195 | transposase | |||
| 7610 | 61 aa hypothetical protein | |||
| 7615 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFQ01ORF7625P | |
| 7620 | R | Ngos1291ORF65P (100% identity) | NgoFQ01ORF7625P | |
| ??? | M | M.NgoJH7ORFGP (100% identity) | CCGG | M.NgoFQ01ORF7625P |
| 7635 | 48 aa hypothetical protein | |||
| 10740 | group 2 glycosyl transferase | |||
| 10745 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoFQ01ORF10750P |
| 10750 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoFQ01ORF10750P |
| 10755 | ribosome-recycling factor | |||
| 11330 | 93 aa hypothetical protein | |||
| 11335 | R | NgoWSIIIP (100% identity) | GGTGA | NgoFQ01ORF11340P |
| 11340 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.NgoFQ01ORF11340P |
| 11345 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoFQ01ORF11340P |
| 11350 | RNA-binding transcriptional accessory protein | |||
| 11985 | GTPase ObgE | |||
| 11990 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.NgoFQ01ORF11990P |
| 11995 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoFQ01ORF11990P |
| 12000 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5830 | tRNA pseudouridine(55) synthase TruB | |||
| 5835 | M | M.Ngo9458ORF5180P (99% identity) | M.NgoFQ01ORF5835P | |
| 5840 | R | NgoSW0236ORF3240P (96% identity) | NgoFQ01ORF5835P | |
| 5845 | alpha-hydroxy-acid oxidizing protein | |||
| 6330 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6335 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoFQ01ORF6340P |
| 6340 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoFQ01ORF6340P |
| 6345 | peptidyl-prolyl cis-trans isomerase | |||