Neisseria gonorrhoeae FQ48 |
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Putative Neisseria gonorrhoeae FQ48 RM systems
Ref: Fouts,D. et al. unpublished
REBASE ref # 27782
Complete sequence: 2,229,997 bp
GenBank #: CP034020
REBASE acronym: NgoFQ48
Org_num: 31978
All begin EGH12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6410 | ABC transporter | |||
| 6415 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoFQ48ORF6415P |
| 6420 | 279 aa hypothetical protein | |||
| 6425 | 186 aa hypothetical protein | |||
| 6430 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoFQ48ORF6415P |
| 6435 | hydroxyacid dehydrogenase | |||
| 6440 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | NgoFQ48ORF6415P |
| 6445 | replication-associated recombination protein A | |||
| 7995 | ATP-dependent Clp protease ATP-binding subunit | |||
| 8000 | R | NgoNCORF566P (100% identity) | NgoFQ48ORF8020P | |
| 8005 | S | S2.NgoWSII (100% identity) | S1.NgoFQ48ORF8020P | |
| 8010 | S | S1.NgoG2891ORF2185P (100% identity) | GCANNNNNNNNTGC | S2.NgoFQ48ORF8020P |
| 8015 | DNA damage-inducible protein D | |||
| 8020 | M | M.NgoSH240ORFMP (100% identity) | M.NgoFQ48ORF8020P | |
| 8025 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ48ORF50P |
| 55 | DNA adenine methylase | |||
| 60 | restriction endonuclease | |||
| ??? | M | M.NgoWPORF8P (100% identity) | M.NgoFQ48ORF65P | |
| 75 | 0 aa hypothetical protein | |||
| 1325 | 48 aa hypothetical protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.NgoFQ48ORF1330P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | NgoFQ48ORF1330P | |
| 1345 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFQ48ORF1330P | |
| 1350 | replication initiation factor | |||
| 5115 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5120 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoFQ48ORF5125P |
| 5125 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoFQ48ORF5125P |
| 5130 | anthranilate synthase component I | |||
| 6545 | 3-isopropylmalate dehydratase small subunit | |||
| 6550 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoFQ48ORF6550P |
| 6555 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoFQ48ORF6550P |
| 6560 | 3-isopropylmalate dehydrogenase | |||
| 8255 | 90 aa hypothetical protein | |||
| 8260 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoFQ48ORF8260P |
| 8265 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoFQ48ORF8260P |
| 8270 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoFQ48ORF8260P | |
| 8275 | uroporphyrinogen decarboxylase | |||
| 8300 | 0 aa hypothetical protein | |||
| 8305 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoFQ48ORF8310P |
| 8310 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.NgoFQ48ORF8310P |
| 8315 | IS1595 family transposase | |||
| 8615 | phenylalanine--tRNA ligase subunit beta | |||
| 8620 | R | NgoWSORF391P (100% identity) | NgoFQ48ORF8630P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoFQ48ORF8630P | |
| 8635 | V | V.NgoWSORF391P (100% identity) | V.NgoFQ48ORF8630P | |
| 8640 | phenylalanine--tRNA ligase subunit alpha | |||
| 9330 | excinuclease ABC subunit UvrA | |||
| 9335 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoFQ48ORF9340P |
| 9340 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoFQ48ORF9340P |
| 9345 | transposase | |||
| 11020 | cysteine--tRNA ligase | |||
| 11025 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoFQ48ORF11030P |
| 11030 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoFQ48ORF11030P |
| 11035 | GTPase ObgE | |||
| 11655 | RNA-binding transcriptional accessory protein | |||
| 11660 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.NgoFQ48ORF11660P |
| 11665 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoFQ48ORF11660P |
| 11670 | R | NgoWSIIIP (100% identity) | GGTGA | NgoFQ48ORF11660P |
| 11675 | 93 aa hypothetical protein | |||
| 12295 | ribosome recycling factor | |||
| 12300 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoFQ48ORF12300P |
| 12305 | R | NgoSW0236ORF9080P (100% identity) | GGCC | NgoFQ48ORF12300P |
| 12310 | group 2 glycosyl transferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6750 | tRNA pseudouridine(55) synthase TruB | |||
| 6755 | M | M.NgoJH1ORFAP (100% identity) | GCAGA | M.NgoFQ48ORF6755P |
| 6760 | R | NgoNCORF1272P (100% identity) | GCAGA | NgoFQ48ORF6755P |
| 6765 | alpha-hydroxy-acid oxidizing protein | |||
| 7250 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 7255 | R | NgoWPIIP (100% identity) | CCACC | NgoFQ48ORF7260P |
| 7260 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoFQ48ORF7260P |
| 7265 | peptidyl-prolyl cis-trans isomerase | |||