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Putative Neisseria gonorrhoeae FQ20 RM systems
Ref: Fouts,D. et al. unpublished
REBASE ref # 27782
Complete sequence: 2,232,677 bp
GenBank #: CP034026
REBASE acronym: NgoFQ20
Org_num: 31975
All begin EGH20_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2445 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
2450 | M | M.NgoWSII (100% identity) | M.NgoFQ20ORF2450P | |
2455 | DNA damage-inducible protein D | |||
2460 | S | S.NgoTFGB2ORFAP (100% identity) | S.NgoFQ20ORF2450P | |
2465 | 0 aa hypothetical protein | |||
2470 | R | NgoWNIIP (100% identity) | NgoFQ20ORF2450P | |
2475 | ATP-dependent Clp protease ATP-binding subunit | |||
4025 | replication-associated recombination protein A | |||
4030 | R | NgoFQ35ORF5510P (100% identity) | GAGNNNNNTAC | NgoFQ20ORF4055P |
4035 | hydroxyacid dehydrogenase | |||
4040 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoFQ20ORF4055P |
4045 | 186 aa hypothetical protein | |||
4050 | 280 aa hypothetical protein | |||
4055 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.NgoFQ20ORF4055P |
4060 | ABC transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
45 | leucine--tRNA ligase | |||
50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ20ORF50P |
55 | DNA adenine methylase | |||
55 | DNA adenine methylase | |||
60 | M | M.Ngos1291ORF5755P (100% identity) | M.NgoFQ20ORF60P | |
65 | 0 aa hypothetical protein | |||
1845 | phenylalanine--tRNA ligase subunit alpha | |||
1850 | V | V.NgoWSORF391P (100% identity) | V.NgoFQ20ORF1855P | |
??? | M | M.NgoWSORF391P (100% identity) | M.NgoFQ20ORF1855P | |
1865 | R | Npo18661ORFHP (100% identity) | NgoFQ20ORF1855P | |
1870 | phenylalanine--tRNA ligase subunit beta | |||
2165 | IS1595 family transposase | |||
2170 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.NgoFQ20ORF2170P |
2175 | S | S.NgoFQ35ORF2170P (100% identity) | GACNNNNNTGA | S.NgoFQ20ORF2170P |
2180 | 0 aa hypothetical protein | |||
2205 | uroporphyrinogen decarboxylase | |||
2210 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoFQ20ORF2220P | |
2215 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoFQ20ORF2220P |
2220 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoFQ20ORF2220P |
2225 | 78 aa hypothetical protein | |||
3915 | 3-isopropylmalate dehydrogenase | |||
3920 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoFQ20ORF3925P |
3925 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoFQ20ORF3925P |
3930 | 3-isopropylmalate dehydratase small subunit | |||
5340 | anthranilate synthase component I | |||
5345 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoFQ20ORF5345P |
5350 | R | NgoFQ35ORF4230P (100% identity) | GCCGGC | NgoFQ20ORF5345P |
5355 | 5-(carboxyamino)imidazole ribonucleotide | |||
6845 | replication initiation factor | |||
6850 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFQ20ORF6865P | |
6855 | R | Ngos1291ORF65P (100% identity) | NgoFQ20ORF6865P | |
??? | M | M.NgoJH7ORFGP (100% identity) | CCGG | M.NgoFQ20ORF6865P |
6870 | 48 aa hypothetical protein | |||
6845 | replication initiation factor | |||
6850 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFQ20ORF6860P | |
6855 | R | Ngos1291ORF65P (100% identity) | NgoFQ20ORF6860P | |
??? | M | M.NgoJH7ORFGP (100% identity) | CCGG | M.NgoFQ20ORF6860P |
6870 | 48 aa hypothetical protein | |||
10790 | group 2 glycosyl transferase | |||
10795 | R | NgoFQ35ORF10790P (100% identity) | GGCC | NgoFQ20ORF10800P |
10800 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoFQ20ORF10800P |
10805 | ribosome recycling factor | |||
11380 | 93 aa hypothetical protein | |||
11385 | R | NgoWSIIIP (100% identity) | GGTGA | NgoFQ20ORF11390P |
11390 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.NgoFQ20ORF11390P |
11395 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoFQ20ORF11390P |
11400 | RNA-binding transcriptional accessory protein | |||
12070 | GTPase ObgE | |||
12075 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoFQ20ORF12075P |
12080 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoFQ20ORF12075P |
12085 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
3210 | peptidyl-prolyl cis-trans isomerase | |||
3215 | M | M.Ngo10792ORF2775P (100% identity) | CCACC | M.NgoFQ20ORF3215P |
3220 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoFQ20ORF3215P |
3225 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3715 | alpha-hydroxy-acid oxidizing protein | |||
3720 | R | NgoWLORF910P (100% identity) | GCAGA | NgoFQ20ORF3725P |
3725 | M | M.NgoJH1ORFAP (100% identity) | GCAGA | M.NgoFQ20ORF3725P |
3730 | tRNA pseudouridine(55) synthase TruB |