Neisseria gonorrhoeae FQ02 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae FQ02 RM systems
Ref: Fouts,D. et al. unpublished
REBASE ref # 27782
Complete sequence: 2,228,346 bp
GenBank #: CP034030
REBASE acronym: NgoFQ02
Org_num: 31973
All begin EGH17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2825 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2830 | M | M.NgoWSII (100% identity) | M.NgoFQ02ORF2830P | |
| 2835 | DNA damage-inducible protein D | |||
| 2840 | S | S.NgoWNII (50% identity) | GCANNNNNNNNTGC | S1.NgoFQ02ORF2830P |
| 2845 | S | S1.NgoJH4ORFGP (100% identity) | S2.NgoFQ02ORF2830P | |
| 2850 | 0 aa hypothetical protein | |||
| 2855 | R | NgoWNIIP (100% identity) | NgoFQ02ORF2830P | |
| 2860 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4440 | replication-associated recombination protein A | |||
| 4445 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | NgoFQ02ORF4470P |
| 4450 | hydroxyacid dehydrogenase | |||
| 4455 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.NgoFQ02ORF4470P |
| 4460 | 186 aa hypothetical protein | |||
| 4465 | 279 aa hypothetical protein | |||
| 4470 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoFQ02ORF4470P |
| 4475 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ02ORF50P |
| 55 | DNA adenine methylase | |||
| 60 | restriction endonuclease | |||
| ??? | M | M.NgoWPORF8P (100% identity) | M.NgoFQ02ORF65P | |
| 75 | 0 aa hypothetical protein | |||
| 1510 | transposase | |||
| 1515 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoFQ02ORF1515P |
| 1520 | R | NgoJH4ORFEP (100% identity) | CCGCGG | NgoFQ02ORF1515P |
| 1525 | excinuclease ABC subunit UvrA | |||
| 2215 | phenylalanine--tRNA ligase subunit alpha | |||
| 2220 | V | V.NgoWSORF391P (100% identity) | V.NgoFQ02ORF2225P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoFQ02ORF2225P | |
| 2235 | R | NgoWSORF391P (100% identity) | NgoFQ02ORF2225P | |
| 2240 | phenylalanine--tRNA ligase subunit beta | |||
| 2535 | IS1595 family transposase | |||
| 2540 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.NgoFQ02ORF2540P |
| 2545 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoFQ02ORF2540P |
| 2550 | 0 aa hypothetical protein | |||
| 2575 | uroporphyrinogen decarboxylase | |||
| 2580 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoFQ02ORF2590P | |
| 2585 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoFQ02ORF2590P |
| 2590 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoFQ02ORF2590P |
| 2595 | 76 aa hypothetical protein | |||
| 4325 | 3-isopropylmalate dehydrogenase | |||
| 4330 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoFQ02ORF4335P |
| 4335 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoFQ02ORF4335P |
| 4340 | 3-isopropylmalate dehydratase small subunit | |||
| 5750 | anthranilate synthase component I | |||
| 5755 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoFQ02ORF5755P |
| 5760 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoFQ02ORF5755P |
| 5765 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 9695 | 0 aa hypothetical protein | |||
| 9700 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFQ02ORF9710P | |
| 9705 | R | Ngos1291ORF65P (100% identity) | NgoFQ02ORF9710P | |
| ??? | M | M.NgoJH7ORFGP (100% identity) | CCGG | M.NgoFQ02ORF9710P |
| 9720 | 48 aa hypothetical protein | |||
| 11115 | cysteine--tRNA ligase | |||
| 11120 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoFQ02ORF11125P |
| 11125 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoFQ02ORF11125P |
| 11130 | GTPase ObgE | |||
| 11765 | RNA-binding transcriptional accessory protein | |||
| 11770 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.NgoFQ02ORF11770P |
| 11775 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoFQ02ORF11770P |
| 11780 | R | NgoWSIIIP (100% identity) | GGTGA | NgoFQ02ORF11770P |
| 11785 | 93 aa hypothetical protein | |||
| 12405 | ribosome recycling factor | |||
| 12410 | M | M.NgoJH7ORFNP (100% identity) | GGCC | M.NgoFQ02ORF12410P |
| 12415 | R | NgoWSORF2276P (99% identity) | GGCC | NgoFQ02ORF12410P |
| 12420 | group 2 glycosyl transferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3610 | peptidyl-prolyl cis-trans isomerase | |||
| 3615 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoFQ02ORF3615P |
| 3620 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoFQ02ORF3615P |
| 3625 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 4115 | alpha-hydroxy-acid oxidizing protein | |||
| 4120 | R | NgoWPORF742P (100% identity) | NgoFQ02ORF4125P | |
| ??? | M | M.NgoSH240ORFJP (100% identity) | M.NgoFQ02ORF4125P | |
| 4135 | tRNA pseudouridine synthase B | |||