Neisseria gonorrhoeae FQ04 |
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Putative Neisseria gonorrhoeae FQ04 RM systems
Ref: Fouts,D. et al. unpublished
REBASE ref # 27782
Complete sequence: 2,217,528 bp
GenBank #: CP034028
REBASE acronym: NgoFQ04
Org_num: 31974
All begin EGH18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2430 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2435 | M | M.NgoWSII (100% identity) | M.NgoFQ04ORF2435P | |
| 2440 | DNA damage-inducible protein D | |||
| 2445 | S | S.NgoTFGB2ORFAP (100% identity) | S.NgoFQ04ORF2435P | |
| 2450 | R | Ngos1291ORF7750P (100% identity) | NgoFQ04ORF2435P | |
| 2455 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4020 | replication-associated recombination protein A | |||
| 4025 | R | NgoWLIP (100% identity) | GAGNNNNNTAC | NgoFQ04ORF4050P |
| 4030 | hydroxyacid dehydrogenase | |||
| 4035 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoFQ04ORF4050P |
| 4040 | 186 aa hypothetical protein | |||
| 4045 | 0 aa hypothetical protein | |||
| 4050 | M | M.NgoJH12ORFKP (100% identity) | GAGNNNNNTAC | M.NgoFQ04ORF4050P |
| 4055 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ04ORF50P |
| 55 | DNA adenine methylase | |||
| 55 | DNA adenine methylase | |||
| 60 | M | M.Ngos1291ORF5755P (100% identity) | M.NgoFQ04ORF60P | |
| 65 | 0 aa hypothetical protein | |||
| 1835 | phenylalanine--tRNA ligase subunit alpha | |||
| 1840 | V | V.NgoWSORF391P (100% identity) | V.NgoFQ04ORF1845P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoFQ04ORF1845P | |
| 1855 | R | NgoWSORF391P (100% identity) | NgoFQ04ORF1845P | |
| 1860 | phenylalanine--tRNA ligase subunit beta | |||
| 2150 | IS1595 family transposase | |||
| 2155 | M | NgoWOORF381P (100% identity) | GACNNNNNTGA | M.NgoFQ04ORF2155P |
| 2160 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoFQ04ORF2155P |
| 2165 | 0 aa hypothetical protein | |||
| 2190 | uroporphyrinogen decarboxylase | |||
| 2195 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoFQ04ORF2205P | |
| 2200 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoFQ04ORF2205P |
| 2205 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoFQ04ORF2205P |
| 2210 | 80 aa hypothetical protein | |||
| 3910 | 3-isopropylmalate dehydrogenase | |||
| 3915 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoFQ04ORF3920P |
| 3920 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoFQ04ORF3920P |
| 3925 | 3-isopropylmalate dehydratase small subunit | |||
| 5340 | anthranilate synthase component I | |||
| 5345 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoFQ04ORF5345P |
| 5350 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoFQ04ORF5345P |
| 5355 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6880 | 60 aa hypothetical protein | |||
| 6885 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFQ04ORF6895P | |
| 6890 | R | Ngos1291ORF65P (100% identity) | NgoFQ04ORF6895P | |
| ??? | M | M.NgoJH7ORFGP (100% identity) | CCGG | M.NgoFQ04ORF6895P |
| 6905 | 48 aa hypothetical protein | |||
| 7130 | excinuclease ABC subunit UvrA | |||
| 7135 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoFQ04ORF7140P |
| 7140 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoFQ04ORF7140P |
| 7145 | transposase | |||
| 10785 | group 2 glycosyl transferase | |||
| 10790 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoFQ04ORF10795P |
| 10795 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoFQ04ORF10795P |
| 10800 | ribosome recycling factor | |||
| 11370 | 0 aa hypothetical protein | |||
| 11375 | R | NgoWSIIIP (100% identity) | GGTGA | NgoFQ04ORF11380P |
| 11380 | M | M1.NgoJH17ORFQP (100% identity) | GGTGA | M1.NgoFQ04ORF11380P |
| 11385 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoFQ04ORF11380P |
| 11390 | RNA-binding transcriptional accessory protein | |||
| 12030 | GTPase ObgE | |||
| 12035 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoFQ04ORF12035P |
| 12040 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoFQ04ORF12035P |
| 12045 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3195 | peptidyl-prolyl cis-trans isomerase | |||
| 3200 | M | M.NgoWFI (100% identity) | CCACC | M.NgoFQ04ORF3200P |
| 3205 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoFQ04ORF3200P |
| 3210 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3695 | alpha-hydroxy-acid oxidizing protein | |||
| 3700 | R | NgoJH8ORFHP (100% identity) | GCAGA | NgoFQ04ORF3705P |
| ??? | M | M.NgoNG196ORF3575P (100% identity) | GCAGA | M.NgoFQ04ORF3705P |
| 3715 | tRNA pseudouridine(55) synthase TruB | |||