Neisseria gonorrhoeae FQ35 |
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Putative Neisseria gonorrhoeae FQ35 RM systems
Ref: Fouts,D. et al. unpublished
REBASE ref # 27782
Complete sequence: 2,232,230 bp
GenBank #: CP034024
REBASE acronym: NgoFQ35
Org_num: 31976
All begin EGH14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2445 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2450 | M | M.NgoWSII (100% identity) | M.NgoFQ35ORF2450P | |
| 2455 | DNA damage-inducible protein D | |||
| 2460 | S | S.NgoTFGB2ORFAP (100% identity) | S.NgoFQ35ORF2450P | |
| 2465 | 0 aa hypothetical protein | |||
| 2470 | R | NgoWNIIP (100% identity) | NgoFQ35ORF2450P | |
| 2475 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5505 | ABC transporter | |||
| 5510 | M | M.NgoPID1ORF461P (100% identity) | GAGNNNNNTAC | M.NgoFQ35ORF5510P |
| 5515 | 280 aa hypothetical protein | |||
| 5520 | 186 aa hypothetical protein | |||
| 5525 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoFQ35ORF5510P |
| 5530 | hydroxyacid dehydrogenase | |||
| 5535 | R | NgoFQ20ORF4055P (100% identity) | GAGNNNNNTAC | NgoFQ35ORF5510P |
| 5540 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ35ORF50P |
| 55 | DNA adenine methylase | |||
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ35ORF60P |
| 55 | DNA adenine methylase | |||
| 60 | M | M.Ngos1291ORF5755P (100% identity) | M.NgoFQ35ORF60P | |
| 65 | 0 aa hypothetical protein | |||
| 1845 | phenylalanine--tRNA ligase subunit alpha | |||
| 1850 | V | V.NgoWSORF391P (100% identity) | V.NgoFQ35ORF1855P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoFQ35ORF1855P | |
| 1865 | R | Npo18661ORFHP (100% identity) | NgoFQ35ORF1855P | |
| 1870 | phenylalanine--tRNA ligase subunit beta | |||
| 2165 | IS1595 family transposase | |||
| 2170 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.NgoFQ35ORF2170P |
| 2175 | S | S.NgoFQ20ORF2170P (100% identity) | GACNNNNNTGA | S.NgoFQ35ORF2170P |
| 2180 | 0 aa hypothetical protein | |||
| 2205 | uroporphyrinogen decarboxylase | |||
| 2210 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoFQ35ORF2220P | |
| 2215 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoFQ35ORF2220P |
| 2220 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoFQ35ORF2220P |
| 2225 | 87 aa hypothetical protein | |||
| 4220 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4225 | R | NgoFQ20ORF5345P (100% identity) | GCCGGC | NgoFQ35ORF4230P |
| 4230 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoFQ35ORF4230P |
| 4235 | anthranilate synthase component I | |||
| 5635 | 3-isopropylmalate dehydratase small subunit | |||
| 5640 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoFQ35ORF5640P |
| 5645 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoFQ35ORF5640P |
| 5650 | 3-isopropylmalate dehydrogenase | |||
| 6845 | replication initiation factor | |||
| 6850 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFQ35ORF6860P | |
| 6855 | R | Ngos1291ORF65P (100% identity) | NgoFQ35ORF6860P | |
| ??? | M | M.NgoJH7ORFGP (100% identity) | CCGG | M.NgoFQ35ORF6860P |
| 6870 | 48 aa hypothetical protein | |||
| 10780 | group 2 glycosyl transferase | |||
| 10785 | R | NgoFQ20ORF10800P (100% identity) | GGCC | NgoFQ35ORF10790P |
| 10790 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoFQ35ORF10790P |
| 10795 | ribosome recycling factor | |||
| 11370 | 93 aa hypothetical protein | |||
| 11375 | R | NgoWSIIIP (100% identity) | GGTGA | NgoFQ35ORF11380P |
| 11380 | M | M1.NgoFQ20ORF11390P (100% identity) | GGTGA | M1.NgoFQ35ORF11380P |
| 11385 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoFQ35ORF11380P |
| 11390 | RNA-binding transcriptional accessory protein | |||
| 12060 | GTPase ObgE | |||
| 12065 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoFQ35ORF12065P |
| 12070 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoFQ35ORF12065P |
| 12075 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5840 | 166 aa hypothetical protein | |||
| 5845 | M | M.NgoSW0259ORF3235P (100% identity) | M.NgoFQ35ORF5845P | |
| 5850 | R | NgoWLORF910P (100% identity) | NgoFQ35ORF5845P | |
| 5855 | alpha-hydroxy-acid oxidizing protein | |||
| 6345 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6350 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoFQ35ORF6355P |
| 6355 | M | M.NgoTFGA2ORF1109P (100% identity) | CCACC | M.NgoFQ35ORF6355P |
| 6360 | peptidyl-prolyl cis-trans isomerase | |||