Neisseria gonorrhoeae FQ36 |
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Putative Neisseria gonorrhoeae FQ36 RM systems
Ref: Fouts,D. et al. unpublished
REBASE ref # 27782
Complete sequence: 2,218,771 bp
GenBank #: CP034022
REBASE acronym: NgoFQ36
Org_num: 31977
All begin EGH13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2450 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 2455 | M | M.NgoTFGB2ORFAP (100% identity) | M.NgoFQ36ORF2455P | |
| 2460 | DNA damage-inducible protein D | |||
| 2465 | S | S.NgoNG290ORF2325P (100% identity) | S.NgoFQ36ORF2455P | |
| 2470 | R | NgoWSIIP (100% identity) | NgoFQ36ORF2455P | |
| 2475 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5545 | ABC transporter | |||
| 5550 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoFQ36ORF5550P |
| 5555 | 279 aa hypothetical protein | |||
| 5560 | 186 aa hypothetical protein | |||
| 5565 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoFQ36ORF5550P |
| 5570 | hydroxyacid dehydrogenase | |||
| 5575 | R | NgoTFGA2ORF948P (100% identity) | GAGNNNNNTAC | NgoFQ36ORF5550P |
| 5580 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ36ORF50P |
| 55 | DNA adenine methylase | |||
| 45 | leucine--tRNA ligase | |||
| 50 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoFQ36ORF65P |
| 55 | DNA adenine methylase | |||
| 60 | restriction endonuclease | |||
| ??? | M | M.NgoWPORF8P (100% identity) | M.NgoFQ36ORF65P | |
| 75 | 0 aa hypothetical protein | |||
| 1850 | phenylalanine--tRNA ligase subunit alpha | |||
| 1855 | V | V.NgoWSORF391P (100% identity) | V.NgoFQ36ORF1860P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoFQ36ORF1860P | |
| 1870 | R | NgoTFGB2ORF299P (100% identity) | NgoFQ36ORF1860P | |
| 1875 | phenylalanine--tRNA ligase subunit beta | |||
| 2165 | IS1595 family transposase | |||
| 2170 | M | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | M.NgoFQ36ORF2170P |
| 2175 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoFQ36ORF2170P |
| 2180 | 0 aa hypothetical protein | |||
| 2205 | uroporphyrinogen decarboxylase | |||
| 2210 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoFQ36ORF2220P | |
| 2215 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoFQ36ORF2220P |
| 2220 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoFQ36ORF2220P |
| 2225 | 0 aa hypothetical protein | |||
| 4255 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 4260 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoFQ36ORF4265P |
| 4265 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoFQ36ORF4265P |
| 4270 | anthranilate synthase component I | |||
| 5685 | 3-isopropylmalate dehydratase small subunit | |||
| 5690 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoFQ36ORF5690P |
| 5695 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoFQ36ORF5690P |
| 5700 | 3-isopropylmalate dehydrogenase | |||
| 6900 | 61 aa hypothetical protein | |||
| 6905 | V | V.Ngos1291ORF65P (100% identity) | V.NgoFQ36ORF6915P | |
| ??? | R | NgoWSORF1801P (100% identity) | NgoFQ36ORF6915P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoFQ36ORF6915P | |
| 6925 | 48 aa hypothetical protein | |||
| 7150 | excinuclease ABC subunit UvrA | |||
| 7155 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoFQ36ORF7160P |
| 7160 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoFQ36ORF7160P |
| 7165 | transposase | |||
| 10875 | group 2 glycosyl transferase | |||
| 10880 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoFQ36ORF10885P |
| 10885 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoFQ36ORF10885P |
| 10890 | ribosome recycling factor | |||
| 11465 | 93 aa hypothetical protein | |||
| 11470 | R | NgoWSIIIP (100% identity) | GGTGA | NgoFQ36ORF11475P |
| 11475 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoFQ36ORF11475P |
| 11480 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoFQ36ORF11475P |
| 11485 | RNA-binding transcriptional accessory protein | |||
| 12150 | GTPase ObgE | |||
| 12155 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoFQ36ORF12155P |
| 12160 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoFQ36ORF12155P |
| 12165 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5890 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.NgoJH7ORFKP (98% identity) | M.NgoFQ36ORF5895P | |
| 5905 | R | NgoTFGB2ORF644P (100% identity) | NgoFQ36ORF5895P | |
| 5910 | alpha-hydroxy-acid oxidizing protein | |||
| 6395 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6400 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoFQ36ORF6405P |
| 6405 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoFQ36ORF6405P |
| 6410 | peptidyl-prolyl cis-trans isomerase | |||