Ref: Fouts,D. et al. unpublished

REBASE ref # 27782

Complete sequence: 2,218,771 bp

GenBank #: CP034022

REBASE acronym: NgoFQ36

Org_num: 31977

 

All begin EGH13_

Type I
ORF Gene Most similar Specificity Name
 
2450 ADP-L-glycero-D-mannoheptose-6-epimerase
2455 M type I restriction-modification system subunit M.NgoFQ36ORF2455P
2460 DNA damage-inducible protein D
2465 S S.NgoNG290ORF2325P (100% identity) S.NgoFQ36ORF2455P
2470 R NgoWSIIP (100% identity) NgoFQ36ORF2455P
2475 ATP-dependent Clp protease ATP-binding subunit
 
5545 ABC transporter
5550 M M.NgoWSI (100% identity) GAGNNNNNTAC M.NgoFQ36ORF5550P
5555 279 aa hypothetical protein
5560 186 aa hypothetical protein
5565 S S.NgoWSI (100% identity) GAGNNNNNTAC S.NgoFQ36ORF5550P
5570 hydroxyacid dehydrogenase
5575 R NgoTFGA2ORF948P (100% identity) GAGNNNNNTAC NgoFQ36ORF5550P
5580 replication-associated recombination protein A
Type II
ORF Gene Most similar Specificity Name
 
45 leucine--tRNA ligase
50 R NgoWSORF8P (100% identity) GATC NgoFQ36ORF50P
55 DNA adenine methylase
 
45 leucine--tRNA ligase
50 R NgoWSORF8P (100% identity) GATC NgoFQ36ORF65P
55 DNA adenine methylase
60 restriction endonuclease
??? M M.NgoWPORF8P (100% identity) M.NgoFQ36ORF65P
75 0 aa hypothetical protein
 
1850 phenylalanine--tRNA ligase subunit alpha
1855 V V.NgoWSORF391P (100% identity) V.NgoFQ36ORF1860P
??? M M.NgoWSORF391P (100% identity) M.NgoFQ36ORF1860P
1870 R HNH endonuclease NgoFQ36ORF1860P
1875 phenylalanine--tRNA ligase subunit beta
 
2165 IS1595 family transposase
2170 M NgoWSORF450P (100% identity) GACNNNNNTGA M.NgoFQ36ORF2170P
2175 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.NgoFQ36ORF2170P
2180 0 aa hypothetical protein
 
2205 uroporphyrinogen decarboxylase
2210 H H.NgoWSORF459P (100% identity) H.NgoFQ36ORF2220P
2215 R NgoWSORF459P (100% identity) GCSGC NgoFQ36ORF2220P
2220 M M.NgoWSORF459P (100% identity) GCSGC M.NgoFQ36ORF2220P
2225 0 aa hypothetical protein
 
4255 5-(carboxyamino)imidazole ribonucleotide
4260 R NgoWSORF1056P (100% identity) GCCGGC NgoFQ36ORF4265P
4265 M M.Ngos1291ORF10080P (100% identity) GCCGGC M.NgoFQ36ORF4265P
4270 anthranilate synthase component I
 
5685 3-isopropylmalate dehydratase small subunit
5690 M DNA cytosine methyltransferase GGNNCC M.NgoFQ36ORF5690P
5695 R NgoWSORF784P (100% identity) GGNNCC NgoFQ36ORF5690P
5700 3-isopropylmalate dehydrogenase
 
6900 61 aa hypothetical protein
6905 V V.NgoWSORF1801P (100% identity) V.NgoFQ36ORF6915P
??? R NgoWSORF1801P (100% identity) NgoFQ36ORF6915P
??? M M.Ngos1291ORF65P (100% identity) M.NgoFQ36ORF6915P
6925 48 aa hypothetical protein
 
7150 excinuclease ABC subunit UvrA
7155 R NgoWSORF259P (100% identity) CCGCGG NgoFQ36ORF7160P
7160 M M.NgoWSORF259P (100% identity) CCGCGG M.NgoFQ36ORF7160P
7165 transposase
 
10875 group 2 glycosyl transferase
10880 R Ngos1291ORF3515P (100% identity) GGCC NgoFQ36ORF10885P
10885 M M.NgoSH240ORFKP (100% identity) GGCC M.NgoFQ36ORF10885P
10890 ribosome recycling factor
 
11465 93 aa hypothetical protein
11470 R NgoWSIIIP (100% identity) GGTGA NgoFQ36ORF11475P
11475 M M2.NgoWSIII (100% identity) GGTGA M1.NgoFQ36ORF11475P
11480 M M2.Ngos1291ORF4080P (100% identity) GGTGA M2.NgoFQ36ORF11475P
11485 RNA-binding transcriptional accessory protein
 
12150 GTPase ObgE
12155 M M.NgoWSORF2052P (100% identity) RGCGCY M.NgoFQ36ORF12155P
12160 R NgoWSORF2052P (100% identity) RGCGCY NgoFQ36ORF12155P
12165 cysteine--tRNA ligase
Type III
ORF Gene Most similar Specificity Name
 
5890 tRNA pseudouridine(55) synthase TruB
??? M M.NgoJH7ORFKP (98% identity) M.NgoFQ36ORF5895P
5905 R NgoTFGB2ORF644P (100% identity) NgoFQ36ORF5895P
5910 alpha-hydroxy-acid oxidizing protein
 
6395 tRNA 2-thiocytidine(32) synthetase TtcA
6400 R Ngos1291ORF8455P (100% identity) CCACC NgoFQ36ORF6405P
6405 M M.NgoWSORF647P (100% identity) CCACC M.NgoFQ36ORF6405P
6410 peptidyl-prolyl cis-trans isomerase