Borrelia burgdorferi JD1 |
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Putative Borrelia burgdorferi JD1 RM systems
Ref: Schutzer,S.E. et al. J. Bacteriol. 193 (4), 1018-1020 (2011)
REBASE ref # 12157
| Sequence length: | GenBank #: | |
| Chromosome: | 922,801 bp | CP002312 |
| plasmid JD1 lp25: | 22,827 bp | CP002308 |
| plasmid JD1 lp28-1: | 24,354 bp | CP002306 |
| plasmid JD1 lp28-3: | 28,797 bp | CP002314 |
| plasmid JD1 lp28-4: | 30,096 bp | CP002318 |
| plasmid JD1 lp28-5: | 24,614 bp | CP002317 |
| plasmid JD1 lp28-7: | 29,993 bp | CP002319 |
| plasmid JD1 lp36: | 22,808 bp | CP002315 |
| plasmid JD1 lp38: | 27,590 bp | CP002325 |
REBASE acronym: BbuJD1
Org_num: 6426
All begin BbuJD1_, BbuJD1_AA, BbuJD1_E, BbuJD1_F, BbuJD1_H, BbuJD1_I, BbuJD1_J, BbuJD1_K, BbuJD1_Y
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 904 | 266 aa conserved hypothetical protein | |||
| 905 | RM | BbuB408ORF5735P (97% identity) | BbuJD1ORF905P | |
| 906 | 95 aa hypothetical protein | |||
| plasmid JD1 lp25 | ||||
| 1 | RM | BbuB379ORF6905P (99% identity) | BbuJD1ORF1P | |
| 4 | outer membrane protein | |||
| 26 | 127 aa conserved hypothetical protein | |||
| 27 | RM | adenine specific DNA methyltransferase | BbuJD1ORF27P | |
| plasmid JD1 lp28-1 | ||||
| 33 | type I restriction enzyme R protein | |||
| ??? | RM | type I restriction enzyme r protein | BbuJD1ORFAP | |
| plasmid JD1 lp28-3 | ||||
| 6 | lipoprotein, putative | |||
| 9 | RM | BbuB379ORF6100P (99% identity) | BbuJD1ORF9P | |
| 13 | 137 aa hypothetical protein | |||
| plasmid JD1 lp28-4 | ||||
| 32 | pseudogene | |||
| 36 | RM | 343 aa conserved hypothetical protein, truncated | BbuJD1ORF36P | |
| 47 | lipoprotein | |||
| plasmid JD1 lp28-5 | ||||
| 12 | 95 aa conserved hypothetical protein | |||
| 13 | RM | BbuJD1ORF905P (37% identity) | BbuJD1ORF13P | |
| 14 | lipoprotein | |||
| 15 | 71 aa conserved hypothetical protein | |||
| 16 | RM | Bma1539ORF5780P (96% identity) | BbuJD1ORF16P | |
| plasmid JD1 lp28-7 | ||||
| 38 | 187 aa hypothetical protein | |||
| 3 | RM | BbuB500ORF5380P (99% identity) | BbuJD1ORF3P | |
| 4 | 71 aa conserved hypothetical protein | |||
| plasmid JD1 lp36 | ||||
| 21 | PF-49 protein | |||
| ??? | RM | type I restriction enzyme r protein n terminus | BbuJD1ORFBP | |
| ??? | 91 aa conserved hypothetical protein | |||
| plasmid JD1 lp38 | ||||
| ??? | RM | BbuB379ORF6905P (99% identity) | BbuJD1ORF1P | |
| 2 | 125 aa conserved hypothetical protein | |||