Rhodobacter sphaeroides AB29 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Rhodobacter sphaeroides AB29 RM systems
Ref: Guzman,M.S. and Bose,A. unpublished
REBASE ref # 27785
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,240,155 bp | CP033450 |
| chromosome 2: | 1,016,275 bp | CP033451 |
REBASE acronym: RspAB29
Org_num: 32001
All begin EBL89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 9140 | M48 family peptidase | |||
| 9145 | R | RspAB27ORF9150P (100% identity) | RspAB29ORF9155P | |
| 9150 | S | S.RspAB27ORF9150P (100% identity) | S.RspAB29ORF9155P | |
| 9155 | M | M.RspAB27ORF9150P (100% identity) | M.RspAB29ORF9155P | |
| 9160 | HNH endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 12650 | 105 aa hypothetical protein | |||
| ??? | M | M.RspLJ20ORF19155P (42% identity) | M.RspAB29ORF12660P | |
| 12665 | 269 aa hypothetical protein | |||
| 12705 | 29 aa hypothetical protein | |||
| 12715 | M | M.RspAB27ORF15065P (100% identity) | M.RspAB29ORF12715P | |
| 12720 | restriction endonuclease | |||
| 12715 | DNA methyltransferase | |||
| 12720 | RM | RspAB27ORF15070P (100% identity) | RspAB29ORF12720P | |
| 12725 | ATPase | |||
| 12765 | transposase | |||
| 12770 | M | M.RspAB27ORF12615P (100% identity) | M.RspAB29ORF12770P | |
| 12775 | 269 aa hypothetical protein | |||
| 12780 | 166 aa hypothetical protein | |||
| 12785 | R | RspAB27ORF12665P (100% identity) | RspAB29ORF12790P | |
| 12790 | M | M.RspAB27ORF12665P (100% identity) | M.RspAB29ORF12790P | |
| 12795 | 63 aa hypothetical protein | |||
| 15130 | tail tape measure protein | |||
| 15135 | M | M.RspAB27ORF15085P (100% identity) | M.RspAB29ORF15135P | |
| 15140 | 64 aa hypothetical protein | |||
| 15975 | ribonuclease HII | |||
| 15980 | M | M.RspWS8NORF12765P (100% identity) | GANTC | M.RspAB29ORF15980P |
| 15985 | alkane 1-monooxygenase | |||
| chromosome 2 | ||||
| 16410 | pseudogene | |||
| 16425 | M | M.RsaORFGP (29% identity) | M.RspAB29ORF16425P | |
| 16430 | helix-turn-helix domain-containing protein | |||
| 18465 | late control protein D | |||
| 18470 | M | M.RspAB27ORF18575P (100% identity) | M.RspAB29ORF18470P | |
| 18475 | restriction endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 15165 | TM0106 family RecB-like putative nuclease | |||
| ??? | R | RspAB27McrBP (100% identity) | RspAB29McrBP | |
| 15175 | R | RspAB27McrCP (100% identity) | RspAB29McrCP | |
| 15180 | 85 aa hypothetical protein | |||