Chryseobacterium carnipullorum F9942 |
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Putative Chryseobacterium carnipullorum F9942 RM systems
Ref: Nicholson,A.C. et al. unpublished
REBASE ref # 27758
Complete sequence: 5,458,793 bp
GenBank #: CP033921
REBASE acronym: Cca9942
Org_num: 31876
All begin EG345_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3180 | XRE family transcriptional regulator | |||
| 3185 | M | M.Csh13533I (100% identity) | M.Cca9942ORF3185P | |
| 3190 | S | S.Csh13533I (100% identity) | S.Cca9942ORF3185P | |
| 3195 | DUF262 domain-containing protein | |||
| 3200 | DUF262 domain-containing protein | |||
| 3205 | R | Csh13533IP (100% identity) | Cca9942ORF3185P | |
| 3210 | M48 family peptidase | |||
| ??? | AAA domain | |||
| 17230 | S | S1.Csh13533ORF4054P (69% identity) | S1.Cca9942ORF17250P | |
| 17235 | integrase | |||
| 17240 | S | S2.AccVI (62% identity) | S2.Cca9942ORF17250P | |
| 17245 | S | S1.Cca188ORF1160P (42% identity) | S3.Cca9942ORF17250P | |
| 17250 | M | M.Csh13533ORF4054P (97% identity) | M.Cca9942ORF17250P | |
| 17255 | R | Cca188ORF1160P (99% identity) | Cca9942ORF17250P | |
| 17260 | 67 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6450 | 279 aa hypothetical protein | |||
| 6455 | M | M.Csh13533ORF1604P (100% identity) | M.Cca9942ORF6455P | |
| 6460 | R | Cca188ORF15480P (100% identity) | Cca9942ORF6455P | |
| 6465 | 581 aa hypothetical protein | |||
| 6465 | 581 aa hypothetical protein | |||
| 6470 | M | M.Cca188ORF15495P (100% identity) | M.Cca9942ORF6470P | |
| 6475 | 371 aa hypothetical protein | |||
| 6825 | 115 aa hypothetical protein | |||
| ??? | M | M.Csh13533ORF1677P (100% identity) | M.Cca9942ORF6830P | |
| 6835 | phosphoadenosine phosphosulfate reductase | |||
| 7790 | phage portal protein | |||
| 7795 | M | M.Csh13533ORF1898P (99% identity) | M.Cca9942ORF7795P | |
| 7800 | 347 aa hypothetical protein | |||
| 7965 | 155 aa hypothetical protein | |||
| 7970 | M | M.Csh13533ORF1938P (100% identity) | M.Cca9942ORF7970P | |
| 7975 | 68 aa hypothetical protein | |||
| 8035 | DUF1376 domain-containing protein | |||
| 8040 | M | M.Cca188ORF17010P (100% identity) | M.Cca9942ORF8040P | |
| 8045 | 106 aa hypothetical protein | |||
| 13055 | DNA repair protein | |||
| 13060 | M | M.Csh13533ORF3100P (100% identity) | M.Cca9942ORF13060P | |
| 13065 | DUF3872 domain-containing protein | |||
| 18035 | 60 aa hypothetical protein | |||
| 18040 | M | M.Csh13533DndCP (100% identity) | M.Cca9942DndCP | |
| 18045 | DNA sulfur modification protein DndD | |||
| 18040 | DNA phosphorothioation system sulfurtransferase | |||
| 18045 | M | M.Csh13533DndDP (100% identity) | M.Cca9942DndDP | |
| 18050 | DUF1832 domain-containing protein | |||
| 18045 | DNA sulfur modification protein DndD | |||
| 18050 | M | M.Csh13533DndEP (100% identity) | M.Cca9942DndEP | |
| 18055 | 172 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14425 | 30S ribosomal protein S1 | |||
| 14430 | R | Csh13533ORF3410P (100% identity) | Cca9942ORF14435P | |
| 14435 | M | M.Csh13533ORF3410P (100% identity) | M.Cca9942ORF14435P | |
| 14440 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17215 | 117 aa hypothetical protein | |||
| 17220 | R | Csh13533McrCP (100% identity) | Cca9942McrCP | |
| ??? | R | Cca188McrBP (100% identity) | Cca9942McrBP | |
| 17230 | restriction endonuclease subunit S | |||