Chryseobacterium carnipullorum G0188 |
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Putative Chryseobacterium carnipullorum G0188 RM systems
Ref: Nicholson,A.C. et al. unpublished
REBASE ref # 27758
Complete sequence: 5,459,074 bp
GenBank #: CP033920
REBASE acronym: Cca188
Org_num: 31877
All begin EG346_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | AAA domain | |||
| 1140 | S | S3.Csh13533ORF4054P (100% identity) | S3.Cca188ORF1160P | |
| 1145 | integrase | |||
| 1150 | S | S2.Csh13533ORF4054P (100% identity) | S2.Cca188ORF1160P | |
| 1155 | S | S1.Csh13533ORF4054P (82% identity) | S1.Cca188ORF1160P | |
| 1160 | M | M.Csh13533ORF4054P (99% identity) | M.Cca188ORF1160P | |
| 1165 | R | Csh13533ORF4054P (99% identity) | Cca188ORF1160P | |
| 1170 | 210 aa hypothetical protein | |||
| 12270 | XRE family transcriptional regulator | |||
| 12275 | M | M.Csh13533I (100% identity) | M.Cca188ORF12275P | |
| 12280 | S | S.Csh13533I (100% identity) | S.Cca188ORF12275P | |
| 12285 | DUF262 domain-containing protein | |||
| 12290 | DUF262 domain-containing protein | |||
| 12295 | R | Csh13533IP (100% identity) | Cca188ORF12275P | |
| 12300 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1930 | 60 aa hypothetical protein | |||
| 1935 | M | M.Csh13533DndCP (100% identity) | M.Cca188DndCP | |
| 1940 | DNA sulfur modification protein DndD | |||
| 1935 | DNA phosphorothioation system sulfurtransferase | |||
| 1940 | M | M.Csh13533DndDP (100% identity) | M.Cca188DndDP | |
| 1945 | DUF1832 domain-containing protein | |||
| 1940 | DNA sulfur modification protein DndD | |||
| 1945 | M | M.Csh13533DndEP (100% identity) | M.Cca188DndEP | |
| 1950 | 172 aa hypothetical protein | |||
| 15475 | 328 aa hypothetical protein | |||
| 15480 | M | M.Csh13533ORF1604P (100% identity) | M.Cca188ORF15480P | |
| 15485 | R | Cca9942ORF6455P (100% identity) | Cca188ORF15480P | |
| 15490 | 581 aa hypothetical protein | |||
| 15490 | 581 aa hypothetical protein | |||
| 15495 | M | M.Cca9942ORF6470P (100% identity) | M.Cca188ORF15495P | |
| 15500 | 371 aa hypothetical protein | |||
| 15810 | 115 aa hypothetical protein | |||
| ??? | M | M.Csh13533ORF1677P (100% identity) | M.Cca188ORF15815P | |
| 15820 | phosphoadenosine phosphosulfate reductase | |||
| 16940 | 155 aa hypothetical protein | |||
| 16945 | M | M.Csh13533ORF1938P (100% identity) | M.Cca188ORF16945P | |
| 16950 | 68 aa hypothetical protein | |||
| 17005 | DUF1376 domain-containing protein | |||
| 17010 | M | M.Cca9942ORF8040P (100% identity) | M.Cca188ORF17010P | |
| 17015 | 106 aa hypothetical protein | |||
| 21305 | DEAD/DEAH box helicase | |||
| 21310 | RM | Cba13CORF8365P (81% identity) | Cca188ORF21310P | |
| 21315 | 320 aa hypothetical protein | |||
| 21960 | DNA repair protein | |||
| 21965 | M | M.Csh13533ORF3100P (100% identity) | M.Cca188ORF21965P | |
| 21970 | DUF3872 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23325 | 30S ribosomal protein S1 | |||
| 23330 | R | Csh13533ORF3410P (100% identity) | Cca188ORF23335P | |
| 23335 | M | M.Csh13533ORF3410P (100% identity) | M.Cca188ORF23335P | |
| 23340 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1125 | 361 aa hypothetical protein | |||
| 1130 | R | Csh13533McrCP (100% identity) | Cca188McrCP | |
| ??? | R | Cca9942McrBP (100% identity) | Cca188McrBP | |
| 1140 | restriction endonuclease subunit S | |||