Vibrio mediterranei 117-T6 |
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Putative Vibrio mediterranei 117-T6 RM systems
Ref: Liu,Q. unpublished
REBASE ref # 18725
| Sequence length: | GenBank #: | |
| Chromosome: | 3,698,726 bp | CP033577 |
| Chromosome: | 2,081,621 bp | CP033578 |
| plasmid unnamed: | 195,680 bp | CP033579 |
REBASE acronym: VmeT6
Org_num: 31728
All begin ECB94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15160 | recombinase family protein | |||
| 15165 | R | Vpa1244ORFCP (96% identity) | TACNNNNNNCTGG | VmeT6IP |
| 15170 | M | M.Vpa1244ORFCP (94% identity) | TACNNNNNNCTGG | M.VmeT6I |
| 15175 | S | S.MkoLM6ORF3736P (35% identity) | TACNNNNNNCTGG | S.VmeT6I |
| 15180 | ATP-binding cassette domain-containing protein | |||
| Chromosome | ||||
| 19690 | Reverse transcriptase (RNA-dependent DNA | |||
| 19695 | R | Vha106ORF12720P (95% identity) | GAGNNNNNNTCGC | VmeT6IIP |
| 19700 | S | S.VspER1AORF13940P (62% identity) | GAGNNNNNNTCGC | S.VmeT6II |
| 19705 | M | M.Vha106ORF12720P (97% identity) | GAGNNNNNNTCGC | M.VmeT6II |
| 19710 | 477 aa hypothetical protein | |||
| 25775 | 1102 aa hypothetical protein | |||
| 25780 | S | S.SspMA440ORF4620P (60% identity) | GAGNNNNNNTGCT | S.VmeT6III |
| 25785 | M | M.Vha106ORF9900P (96% identity) | GAGNNNNNNTGCT | M.VmeT6III |
| 25790 | R | Vhaf5ORFAP (94% identity) | GAGNNNNNNTGCT | VmeT6IIIP |
| 25795 | sigma-54-dependent Fis family transcriptional | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7260 | 87 aa hypothetical protein | |||
| 7265 | M | M.VshORF13676P (91% identity) | M.VmeT6ORF7265P | |
| 7270 | zinc-binding protein | |||
| 7660 | ribulose-phosphate 3-epimerase | |||
| 7665 | M | M.VspER1ADamP (100% identity) | GATC | M.VmeT6Dam |
| 7670 | cell division protein DamX | |||
| 14295 | replication endonuclease | |||
| 14300 | M | M.Vco1ORF13200P (92% identity) | M.VmeT6ORF14300P | |
| 14305 | XRE family transcriptional regulator | |||
| plasmid unnamed | ||||
| 26990 | 101 aa hypothetical protein | |||
| 26995 | M | M.VspG11DndBP (75% identity) | M.VmeT6DndBP | |
| 27000 | nucleotidyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15200 | HNH endonuclease | |||
| 15205 | R | VspEvh12McrBP (89% identity) | VmeT6McrBP | |
| 15210 | R | ValK08M4McrCP (87% identity) | VmeT6McrCP | |
| 15215 | 71 aa hypothetical protein | |||