Salmonella enterica subsp. enterica serovar Typhi 311189_217186 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi 311189_217186 RM systems
Ref: Cortes,M.F. et al. unpublished
REBASE ref # 27700
| Sequence length: | GenBank #: | |
| Chromosome: | 4,782,348 bp | CP029646 |
| plasmid pHCM1: | 216,963 bp | CP029645 |
| plasmid pHCM2: | 106,706 bp | CP029647 |
REBASE acronym: Sen217186
Org_num: 31665
All begin SM217186_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5986 | endoribonuclease SymE | |||
| 5988 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen217186ORFAP |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen217186ORFAP |
| 5980 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen217186ORFAP |
| 5987 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1430 | bacteriophage protein | |||
| 1427 | M | M.StyTORF1926P (100% identity) | M.Sen217186ORF1427P | |
| 1429 | bacteriophage protein | |||
| 1440 | bacteriophage protein | |||
| 4399 | M | M.StyTORF1914P (100% identity) | M.Sen217186ORF4399P | |
| 1443 | bacteriophage protein | |||
| 2582 | DMT superfamily transporter inner membrane | |||
| 2596 | V | V.StyTDcmP (100% identity) | V.Sen217186DcmP | |
| 2591 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen217186DcmP |
| 2598 | 231 aa hypothetical protein | |||
| 4574 | Fis DNA-binding protein | |||
| 4182 | M | adenine-specific DNA-modification methylase | ATGCAT | M.Sen217186ORF4182P |
| 4181 | 54 aa hypothetical protein | |||
| 239 | 75 aa hypothetical protein | |||
| 248 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen217186ORF248P |
| 247 | endonuclease | |||
| 5288 | cell division protein DamX | |||
| 5290 | M | DNA adenine methylase | GATC | M.Sen217186DamP |
| 5285 | ribulose-phosphate 3-epimerase | |||
| 5693 | bacteriophage replication protein A | |||
| 5700 | M | M.StyTORF4329P (100% identity) | M.Sen217186ORF5700P | |
| 5701 | exonuclease | |||
| plasmid pHCM1 | ||||
| 7271 | 385 aa hypothetical protein | |||
| 7272 | M | M.Ype21801ORF197P (100% identity) | M.Sen217186ORF7272P | |
| 7288 | 273 aa hypothetical protein | |||
| 7401 | 439 aa hypothetical protein | |||
| 7400 | M | M.StypAKU1ORFCP (100% identity) | M.Sen217186ORF7400P | |
| 7402 | nuclease | |||
| plasmid pHCM2 | ||||
| 7172 | 76 aa hypothetical protein | |||
| 6095 | M | M.StyCORF112P (100% identity) | M.Sen217186ORF6095P | |
| 6101 | 308 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 735 | metabolite transport protein | |||
| 739 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen217186ORF739P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen217186ORF739P |
| 734 | terminal oxidase subunit I | |||
| 2610 | 462 aa hypothetical protein | |||
| 2602 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen217186ORF2602P | |
| 2606 | R | StyTORF872P (100% identity) | Sen217186ORF2602P | |
| 2611 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5980 | subunit R of type I restriction-modification | |||
| 5987 | R | StyTMrrP (100% identity) | Sen217186MrrP | |
| 5989 | 95 aa hypothetical protein | |||