Salmonella enterica subsp. enterica serovar Typhi 343077_278127 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhi 343077_278127 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Complete sequence: 4,807,245 bp
GenBank #: CP029863
REBASE acronym: Sen278127
Org_num: 31667
All begin SM278127_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6049 | endoribonuclease SymE | |||
| 6050 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen278127ORF6050P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen278127ORF6050P |
| 6048 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen278127ORF6050P |
| 6052 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1432 | bacteriophage protein | |||
| 5411 | M | M.StyTORF1926P (100% identity) | M.Sen278127ORF5411P | |
| 1424 | bacteriophage protein | |||
| 1440 | bacteriophage protein | |||
| 1439 | M | M.StyTORF1914P (100% identity) | M.Sen278127ORF1439P | |
| 1442 | bacteriophage protein | |||
| 2597 | DMT superfamily transporter inner membrane | |||
| 2611 | V | V.StyTDcmP (100% identity) | V.Sen278127DcmP | |
| 2612 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen278127DcmP |
| 2591 | 231 aa hypothetical protein | |||
| 5586 | Fis DNA-binding protein | |||
| 4181 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen278127ORF4181P |
| 4179 | 54 aa hypothetical protein | |||
| 853 | 75 aa hypothetical protein | |||
| 898 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen278127ORF898P |
| 899 | endonuclease | |||
| 5052 | cell division protein DamX | |||
| 5054 | M | M.StyTDamP (100% identity) | GATC | M.Sen278127DamP |
| 5056 | ribulose-phosphate 3-epimerase | |||
| 5765 | bacteriophage replication protein A | |||
| 5766 | M | M.StyTORF4329P (100% identity) | M.Sen278127ORF5766P | |
| 5769 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5387 | metabolite transport protein | |||
| 689 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen278127ORF689P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen278127ORF689P |
| 692 | terminal oxidase subunit I | |||
| 2624 | 462 aa hypothetical protein | |||
| 2622 | M | M.SmaBWH35ORF16840P (100% identity) | M.Sen278127ORF2622P | |
| 2625 | R | StyTORF872P (100% identity) | Sen278127ORF2622P | |
| 2623 | PilV-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6048 | subunit R of type I restriction-modification | |||
| 6052 | R | StyTMrrP (100% identity) | Sen278127MrrP | |
| 6053 | 95 aa hypothetical protein | |||