Salmonella enterica subsp. enterica serovar Typhi 343076_241106 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 343076_241106 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Complete sequence: 4,775,702 bp
GenBank #: CP029899
REBASE acronym: Sen241106
Org_num: 31637
All begin SM241106_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5913 | endoribonuclease SymE | |||
| 5909 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen241106ORF5909P |
| ??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen241106ORF5909P |
| 5915 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen241106ORF5909P |
| 5916 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1417 | bacteriophage protein | |||
| 1415 | M | M.StyTORF1926P (100% identity) | M.Sen241106ORF1415P | |
| 1410 | bacteriophage protein | |||
| 4362 | bacteriophage protein | |||
| 1425 | M | M.StyTORF1914P (100% identity) | M.Sen241106ORF1425P | |
| 1429 | bacteriophage protein | |||
| 2584 | DMT superfamily transporter inner membrane | |||
| 2583 | V | V.StyTDcmP (100% identity) | V.Sen241106DcmP | |
| 2582 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen241106DcmP |
| 2586 | 231 aa hypothetical protein | |||
| 4142 | Fis DNA-binding protein | |||
| 4532 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen241106ORF4532P |
| 4145 | 54 aa hypothetical protein | |||
| 268 | 75 aa hypothetical protein | |||
| 303 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen241106ORF303P |
| 307 | endonuclease | |||
| 5234 | cell division protein DamX | |||
| 5233 | M | DNA adenine methylase | GATC | M.Sen241106DamP |
| 5236 | ribulose-phosphate 3-epimerase | |||
| 6855 | replication endonuclease | |||
| 5647 | M | M.StyTORF4329P (100% identity) | M.Sen241106ORF5647P | |
| 5644 | exonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 686 | metabolite transport protein | |||
| 4228 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen241106ORF4228P |
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen241106ORF4228P |
| 695 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5915 | subunit R of type I restriction-modification | |||
| 5916 | R | StyTMrrP (100% identity) | Sen241106MrrP | |
| 5914 | 95 aa hypothetical protein | |||