Alistipes shahii WAL 8301 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Alistipes shahii WAL 8301 RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12130
Complete sequence: 3,763,317 bp
GenBank #: FP929032
REBASE acronym: AshWAL
Org_num: 6404
All begin AL1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16390 | Predicted metal-dependent hydrolase | |||
| 16400 | R | Ash8301ORF7355P (100% identity) | AshWALORF16440P | |
| 16410 | 236 aa hypothetical protein | |||
| 16420 | S | S.Ash8301ORF7355P (100% identity) | S1.AshWALORF16440P | |
| 16430 | 242 aa hypothetical protein | |||
| 16440 | M | M.Ash8301ORF7355P (100% identity) | M.AshWALORF16440P | |
| 16450 | S | S1.PmeBin239ORFDP (99% identity) | S2.AshWALORF16440P | |
| 16460 | Plasmid recombination enzyme. | |||
| 19040 | MORN repeat variant. | |||
| 19050 | M | M.Ash8301ORF5995P (100% identity) | M.AshWALORF19050P | |
| ??? | S | S1.PmeBin48ORFCP (40% identity) | S1.AshWALORF19050P | |
| ??? | S | S2.Ash8301ORF5995P (43% identity) | S2.AshWALORF19050P | |
| 19070 | hypothetical protein | |||
| 19080 | hypothetical protein | |||
| 19090 | R | Ash8301ORF5995P (100% identity) | AshWALORF19050P | |
| 19100 | hypothetical protein | |||
| 24400 | Predicted phosphoesterase or phosphohydrolase | |||
| 24410 | M | M.Ash8301ORF10370P (100% identity) | M.AshWALORF24410P | |
| 24420 | 513 aa hypothetical protein | |||
| 24430 | Helix-turn-helix. | |||
| 24440 | R | Ash8301ORF10400P (100% identity) | AshWALORF24470P | |
| 24460 | Protein of unknown function | |||
| 24470 | M | M.Ash8301ORF10400P (100% identity) | M.AshWALORF24470P | |
| 24480 | Virulence protein | |||
| 24490 | S | S1.Ash8301ORF10400P (99% identity) | S1.AshWALORF24470P | |
| ??? | S | S2.Ash8301ORF10400P (100% identity) | S2.AshWALORF24470P | |
| 24510 | 351 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1560 | 172 aa hypothetical protein | |||
| 1570 | M | M.Ash8301ORF13200P (100% identity) | M.AshWALORF1570P | |
| 1580 | 96 aa hypothetical protein | |||
| 1660 | single stranded DNA-binding protein (ssb) | |||
| 1670 | M | M.Ash8301ORF13270P (100% identity) | M.AshWALORF1670P | |
| 1680 | ATPase involved in DNA replication initiation | |||
| 8750 | DNA N-6-adenine-methyltransferase (Dam). | |||
| 8760 | M | M.Ash8301ORF1695P (100% identity) | ACGCGT | M.AshWALORF8760P |
| 8770 | Conjugative transposon protein TraO. | |||
| 19600 | 55 aa hypothetical protein | |||
| 19610 | RM | Bun113350ORF23010P (100% identity) | AshWALORF19610P | |
| 19630 | Site-specific recombinases, DNA invertase Pin | |||
| 26490 | 130 aa hypothetical protein | |||
| 26510 | C | C.AspBBH3ORF17770P (100% identity) | C.AshWALORF26520P | |
| 26520 | M | M.Ash8301ORF11425P (95% identity) | CTAG | M.AshWALORF26520P |
| 26530 | R | AspBBH3ORF17770P (97% identity) | CTAG | AshWALORF26520P |
| 26540 | DNA-methyltransferase (dcm) | |||
| 26530 | MjaI restriction endonuclease. | |||
| 26540 | M | M.AspBBH3ORF17790P (100% identity) | M.AshWALORF26540P | |
| 26550 | R | Ash8301ORF11435P (99% identity) | AshWALORF26540P | |
| 26560 | 41 aa hypothetical protein | |||