Sphingobium yanoikuyae SJTF8 |
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Putative Sphingobium yanoikuyae SJTF8 RM systems
Ref: Yin,C. et al. unpublished
REBASE ref # 27657
| Sequence length: | GenBank #: | |
| Chromosome: | 5,172,777 bp | CP033230 |
| plasmid pF1: | 505,328 bp | CP033227 |
REBASE acronym: SyaF8
Org_num: 31547
All begin EBF16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11605 | type II toxin-antitoxin system ParD family | |||
| 11610 | R | SteJH3ORF3140P (76% identity) | SyaF8ORF11620P | |
| 11615 | S | S.PinP72I (33% identity) | S.SyaF8ORF11620P | |
| 11620 | M | M.SteJH3ORF3140P (87% identity) | M.SyaF8ORF11620P | |
| 11625 | 128 aa hypothetical protein | |||
| 15695 | restriction endonuclease | |||
| 15700 | S | S.Pmo923ORF22950P (56% identity) | S.SyaF8ORF15705P | |
| 15705 | M | M.Nsp12ORF4379P (95% identity) | M.SyaF8ORF15705P | |
| 15710 | R | Nsp12ORF4379P (95% identity) | SyaF8ORF15705P | |
| 15715 | 1083 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14975 | ArsR family transcriptional regulator | |||
| ??? | M | M.SyaTJORF13370P (100% identity) | GANTC | M.SyaF8ORF14980P |
| 14985 | dihydropteroate synthase | |||
| 19585 | DEAD/DEAH box helicase | |||
| ??? | RM | Fspalg1ORFCP (70% identity) | SyaF8ORF19590P | |
| 19600 | calmodulin-binding protein | |||
| 23535 | sodium-translocating pyrophosphatase | |||
| 23540 | M | M.SyaTJORF12470P (100% identity) | M.SyaF8ORF23540P | |
| 23545 | TonB-dependent siderophore receptor | |||
| plasmid pF1 | ||||
| 775 | 453 aa hypothetical protein | |||
| 780 | M | M.SspYBL2ORF22390P (100% identity) | M.SyaF8ORF780P | |
| 785 | 358 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15690 | recombinase family protein | |||
| 15695 | R | PedPe01MrrP (93% identity) | SyaF8MrrP | |
| 15700 | type I restriction endonuclease subunit S | |||
| ??? | hypothetical protein | |||
| 19600 | R | SspOPL5McrCP (65% identity) | SyaF8McrCP | |
| ??? | R | SspXS10McrBP (45% identity) | SyaF8McrBP | |
| 19610 | restriction endonuclease | |||