Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068045 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN068045 RM systems
Ref: Frazao,M. unpublished
REBASE ref # 27070
Contig set: 4,847,678 bp
GenBank #: PHIO00000000 (NZ_PHIO00000000)
REBASE acronym: Sen68045
Org_num: 31380
All begin CU622_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8720 | endoribonuclease SymE | |||
| 8725 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen68045ORF8730P |
| 8730 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen68045ORF8730P |
| 8735 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen68045ORF8730P |
| 8740 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10750 | drug/metabolite exporter YedA | |||
| 10755 | V | V.StyUK1DcmP (100% identity) | V.Sen68045DcmP | |
| 10760 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen68045DcmP |
| 10765 | phosphohydrolase | |||
| 15885 | recombination-associated protein RdgC | |||
| 15890 | M | M.Sen68041ORF9010P (100% identity) | M.Sen68045ORF15890P | |
| 15905 | 61 aa hypothetical protein | |||
| 21470 | 221 aa hypothetical protein | |||
| 21475 | M | M.Sens29958ORF6205P (100% identity) | M.Sen68045ORF21475P | |
| 21480 | DUF550 domain-containing protein | |||
| 20205 | Fis family transcriptional regulator | |||
| 20210 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen68045ORF20210P |
| 20215 | DUF2556 domain-containing protein | |||
| 8550 | 363 aa hypothetical protein | |||
| 8555 | RM | StyUK1IV (100% identity) | GATCAG | Sen68045ORF8555P |
| 8560 | BREX system P-loop protein BrxC | |||
| 2060 | SPOR domain-containing protein | |||
| 2065 | M | M.StyTDamP (100% identity) | GATC | M.Sen68045DamP |
| 2070 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4065 | MFS transporter | |||
| 4070 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen68045ORF4070P |
| 4075 | R | StyUK1IP (99% identity) | CAGAG | Sen68045ORF4070P |
| 4080 | 33 aa hypothetical protein | |||
| 16155 | maturation control protein | |||
| 16160 | R | Sen68041ORF8735P (100% identity) | AGACC | Sen68045ORF16165P |
| ??? | M | M.Sen68041ORF8735P (100% identity) | AGACC | M.Sen68045ORF16165P |
| 16170 | modulator protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8735 | type I restriction-modification system | |||
| 8740 | R | StyUK1MrrP (100% identity) | Sen68045MrrP | |
| 8745 | 95 aa hypothetical protein | |||