Desulfovibrio vulgaris RCH1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Desulfovibrio vulgaris RCH1 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12126
| Sequence length: | GenBank #: | |
| Chromosome: | 3,532,052 bp | CP002297 |
| plasmid pDEVAL01: | 202,305 bp | CP002298 |
REBASE acronym: DvuRCH1
Org_num: 6399
All begin Deval_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1585 | 192 aa hypothetical protein | |||
| 1586 | M | M.DvuI (100% identity) | TGACNNNNNNTTC | M.DvuRCH1ORF1586P |
| 1587 | 337 aa hypothetical protein | |||
| 1588 | 55 aa hypothetical protein | |||
| 1589 | S | S.DvuI (100% identity) | TGACNNNNNNTTC | S.DvuRCH1ORF1586P |
| 1590 | protein of unknown function DUF2188 | |||
| 1591 | R | DvuI (100% identity) | TGACNNNNNNTTC | DvuRCH1ORF1586P |
| 1592 | protein of unknown function DUF45 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1014 | ApbE family lipoprotein | |||
| 1015 | M | M.DvuORF1098P (100% identity) | M.DvuRCH1ORF1015P | |
| 1016 | 64 aa hypothetical protein | |||
| 1295 | 179 aa hypothetical protein | |||
| 1296 | RM | DvuORF2022P (100% identity) | DvuRCH1ORF1296P | |
| 1297 | 155 aa hypothetical protein | |||
| 1551 | histidine kinase | |||
| 1552 | M | M.DvuORF1746P (100% identity) | M.DvuRCH1ORF1552P | |
| 1553 | helix-turn-helix domain protein | |||
| 1778 | 118 aa hypothetical protein | |||
| 1779 | M | M.DvuORF1515P (99% identity) | M.DvuRCH1ORF1779P | |
| 1780 | 135 aa hypothetical protein | |||
| 2025 | 225 aa hypothetical protein | |||
| 2026 | RM | DvuIII (100% identity) | CACNCAC | DvuRCH1ORF2026P |
| 2027 | 75 aa hypothetical protein | |||
| 2523 | 66 aa hypothetical protein | |||
| 2524 | M | M.DvuORF2733P (100% identity) | M.DvuRCH1ORF2524P | |
| 2525 | Domain of unknown function DUF1786 putative | |||
| 2622 | 233 aa hypothetical protein | |||
| 2623 | R | DvuORF2842P (100% identity) | CCWGG | DvuRCH1ORF2624P |
| 2624 | M | M.DvuORF2842P (100% identity) | CCWGG | M.DvuRCH1ORF2624P |
| 2625 | 287 aa hypothetical protein | |||
| 2658 | 240 aa hypothetical protein | |||
| 2659 | M | M.DvuORF2878P (100% identity) | M.DvuRCH1ORF2659P | |
| 2660 | P4 alpha zinc-binding domain protein | |||
| plasmid pDEVAL01 | ||||
| 3111 | 72 aa hypothetical protein | |||
| 3112 | M | M.DvuII (98% identity) | CTCGAG | M.DvuRCH1ORF3112P |
| 3113 | R | DvuIIP (100% identity) | CTCGAG | DvuRCH1ORF3112P |
| 3114 | CAAX prenyl protease-related protein | |||