Rhodomicrobium vannielii ATCC 17100 |
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Putative Rhodomicrobium vannielii ATCC 17100 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 13297
Complete sequence: 4,014,469 bp
GenBank #: CP002292 (NC_014664)
REBASE acronym: RvaD
Org_num: 6397
All begin Rvan_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1239 | 104 aa hypothetical protein | |||
| ??? | M | N-6 DNA methylase | M.RvaDORF1241P | |
| 1242 | peptidase C14 caspase catalytic subunit p20 | |||
| 1904 | 137 aa hypothetical protein | |||
| 1905 | R | BspANAM02ORF40520P (71% identity) | RvaDORF1907P | |
| 1906 | S | S.Msp432AORF1185P (38% identity) | S.RvaDORF1907P | |
| 1907 | M | M.Bsp51765ORF7105P (76% identity) | M.RvaDORF1907P | |
| 1908 | Integrase catalytic region | |||
| 2831 | protein of unknown function DUF45 | |||
| 2832 | R | Agh23848ORF2009P (69% identity) | RvaDORF2836P | |
| 2833 | S | S.CthQYYORFCP (41% identity) | S.RvaDORF2836P | |
| 2834 | 46 aa hypothetical protein | |||
| 2835 | filamentation induced by cAMP protein Fic | |||
| 2836 | M | M.Ssp4073ORF64400P (60% identity) | M.RvaDORF2836P | |
| 3140 | Resolvase domain protein | |||
| 3141 | R | RcaY262ORF11125P (78% identity) | RvaDORF3143P | |
| 3142 | S | S.SspAAP5ORF415P (25% identity) | S.RvaDORF3143P | |
| 3143 | M | M.RcaY262ORF11125P (88% identity) | M.RvaDORF3143P | |
| 3144 | ParB domain protein nuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1155 | 84 aa hypothetical protein | |||
| 1156 | M | M.Rla166ORF495P (94% identity) | GANTC | M.RvaDORF1156P |
| 1157 | 224 aa hypothetical protein | |||
| 1443 | domain of unknown function DUF1738 | |||
| 1444 | R | EsaDBMcrB2P (42% identity) | RvaDMcrBP | |
| 1445 | S1/P1 nuclease | |||
| 1481 | HNH nuclease | |||
| 1482 | V | V.Ssp744ORF800P (51% identity) | V.RvaDORF1484P | |
| 1483 | R | OalORFAP (78% identity) | GTCGAC | RvaDORF1484P |
| 1484 | M | M.OalORFAP (84% identity) | GTCGAC | M.RvaDORF1484P |
| 1485 | 66 aa hypothetical protein | |||
| 1485 | 66 aa hypothetical protein | |||
| 1486 | M | M.AmuDK41ORF940P (39% identity) | M.RvaDORF1486P | |
| 1487 | 64 aa hypothetical protein | |||
| 3169 | restriction endonuclease | |||
| 3170 | RM | Bel61ORF24315P (53% identity) | RvaDORF3170P | |
| 3171 | Integrase catalytic region | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3168 | 412 aa hypothetical protein | |||
| 3169 | R | Asp501MrrP (78% identity) | RvaDMrrP | |
| 3170 | 978 aa hypothetical protein SPO1926 | |||