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Putative Agrobacterium tumefaciens 1D1108 RM systems
Ref: Cho,S.-T. et al. unpublished
REBASE ref # 27623
Sequence length: | GenBank #: | |
chromosome circular: | 2,799,706 bp | CP032921 |
chromosome linear: | 2,106,029 bp | CP032922 |
plasmid pAt1D1108b: | 183,311 bp | CP032924 |
REBASE acronym: Atu1108
Org_num: 31479
All begin At1D1108_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome linear | ||||
26790 | 119 aa hypothetical protein | |||
26800 | S | S.Tte7101ORF72770P (23% identity) | S.Atu1108ORF26810P | |
26810 | M | M.RspX9ORFAP (90% identity) | M.Atu1108ORF26810P | |
26820 | R | AtuF001ORF19270P (95% identity) | Atu1108ORF26810P | |
26830 | 105 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome circular | ||||
1320 | 140 aa hypothetical protein | |||
1330 | M | M.AfaL11ORFAP (95% identity) | M.Atu1108ORF1330P | |
1340 | pH adaption potassium efflux system protein | |||
4080 | 366 aa hypothetical protein | |||
4090 | M | M.Rsp2774ORF7980P (100% identity) | GANTC | M.Atu1108ORF4090P |
4100 | hydrolase | |||
chromosome linear | ||||
26830 | 105 aa hypothetical protein | |||
26840 | M | M.Pph13350ORF77P (94% identity) | M.Atu1108ORF26840P | |
26850 | R | Pph13350ORF77P (89% identity) | Atu1108ORF26840P | |
26860 | 361 aa hypothetical protein | |||
34570 | 403 aa hypothetical protein | |||
34580 | M | M1.RspZX09ORF9045P (95% identity) | M.Atu1108ORF34580P | |
34590 | 192 aa hypothetical protein | |||
34600 | 116 aa hypothetical protein | |||
34610 | M | M.AtuYub001ORF23585P (97% identity) | M.Atu1108ORF34610P | |
34620 | 61 aa hypothetical protein | |||
plasmid pAt1D1108b | ||||
50400 | 61 aa hypothetical protein | |||
50410 | RM | AviCG957ORF27355P (93% identity) | Atu1108ORF50410P | |
50420 | 238 aa hypothetical protein |