Pseudomonas syringae pv. actinidiae Shaanxi_M228 |
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Putative Pseudomonas syringae pv. actinidiae Shaanxi_M228 RM systems
Ref: Butler,M.I. et al. PLoS ONE 8 (2), e57464 (2013)
REBASE ref # 15612
Complete sequence: 6,674,594 bp
GenBank #: CP032631
REBASE acronym: PsyM228
Org_num: 29942
All begin CN228_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 25 | M | M.PsyYXH1ORFAP (100% identity) | GAYCNNNNNCTGC | M.PsyM228I |
| 30 | S | S1.PsyYXH1ORFAP (100% identity) | GAYCNNNNNCTGC | S.PsyM228I |
| 35 | R | PsyYXH1ORFAP (100% identity) | GAYCNNNNNCTGC | PsyM228IP |
| 40 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4630 | IS3 family transposase | |||
| ??? | RM | PsyQSY6ORFEP (100% identity) | PsyM228ORFEP | |
| 4650 | ATP-dependent helicase | |||
| 8420 | IS3-like element ISPsy31 family transposase | |||
| ??? | M | M.PsyYXH1ORFDP (100% identity) | M.PsyM228ORFDP | |
| 8430 | ATP-binding protein | |||
| 8435 | R | PsyYXH1ORFDP (100% identity) | PsyM228ORFDP | |
| 8440 | PD-(D/E)XK motif protein | |||
| 30365 | ATP-binding protein | |||
| 30370 | M | M.PsyYXH1ORFFP (100% identity) | CTCGAG | M.PsyM228ORFBP |
| 30375 | 236 aa hypothetical protein | |||
| 30380 | R | PsyYXH1ORFFP (100% identity) | CTCGAG | PsyM228ORFBP |
| 30385 | magnesium chelatase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23220 | 175 aa hypothetical protein | |||
| 23225 | R | PsyYXH1ORFCP (100% identity) | PsyM228ORFCP | |
| ??? | M | M.PsyYXH1ORFCP (100% identity) | M.PsyM228ORFCP | |
| 23235 | membrane-associated oxidoreductase | |||