Citrobacter freundii HM38 |
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Putative Citrobacter freundii HM38 RM systems
Ref: Anderson,M.T. et al. Sci Rep 8 (1), 11792 (2018)
REBASE ref # 27586
Complete sequence: 4,899,014 bp
GenBank #: CP024672
REBASE acronym: CfrHM38
Org_num: 31399
All begin CUC52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23960 | endoribonuclease SymE | |||
| 23965 | S | S.Cfr7749CORF3977P (100% identity) | GAAYNNNNNNNGTTG | S.CfrHM38I |
| 23970 | M | M.Cfr7749CORF3977P (99% identity) | GAAYNNNNNNNGTTG | M.CfrHM38I |
| 23975 | R | CfrR47ORF11150P (100% identity) | GAAYNNNNNNNGTTG | CfrHM38IP |
| 23980 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6185 | DNA breaking-rejoining protein | |||
| 6190 | M | M.Csp107ORF4239P (94% identity) | M.CfrHM38ORF6190P | |
| 6195 | heme-binding virulence factor | |||
| 11265 | 72 aa hypothetical protein | |||
| 11270 | M | M.Cfr393ORFCP (92% identity) | M.CfrHM38ORF11270P | |
| 11275 | 147 aa hypothetical protein | |||
| 11585 | drug/metabolite exporter YedA | |||
| 11590 | V | V.CspS39ORF13780P (100% identity) | CCWGG | V.CfrHM38IIIP |
| 11595 | M | M.CfrGDcmP (100% identity) | CCWGG | M.CfrHM38III |
| 11600 | phosphohydrolase | |||
| 15070 | replication endonuclease | |||
| 15075 | M | M.Cfr7749CORF2231P (100% identity) | M.CfrHM38ORF15075P | |
| 15080 | 75 aa hypothetical protein | |||
| 18520 | Fis family transcriptional regulator | |||
| 18525 | M | M.CfrSA79ORF7225P (100% identity) | ATGCAT | M.CfrHM38II |
| 18530 | DUF2556 domain-containing protein | |||
| 19090 | ribulose-phosphate 3-epimerase | |||
| 19095 | M | M.Cfr7749CDamP (100% identity) | GATC | M.CfrHM38DamP |
| 19100 | cell division protein DamX | |||