Citrobacter freundii UMH16 |
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Putative Citrobacter freundii UMH16 RM systems
Ref: Anderson,M.T. et al. Sci Rep 8 (1), 11792 (2018)
REBASE ref # 27586
| Sequence length: | GenBank #: | |
| Chromosome: | 5,195,086 bp | CP024677 |
| plasmid pUMH16: | 51,504 bp | CP024678 |
REBASE acronym: CfrMH16
Org_num: 31403
All begin CUC48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12090 | M48 family peptidase | |||
| 12095 | R | CfrUKJ86ORF15655P (100% identity) | ACAGNNNNNCCT | CfrMH16IP |
| 12100 | S | S.CfrUKJ86ORF15655P (97% identity) | ACAGNNNNNCCT | S.CfrMH16I |
| 12105 | M | M.CfrUKJ86ORF15655P (100% identity) | ACAGNNNNNCCT | M.CfrMH16I |
| 12125 | CDP-diacylglycerol--glycerol-3-phosphate | |||
| 24380 | molybdopterin-guanine dinucleotide biosynthesis | |||
| 24385 | M | M.RplWA001ORF24580P (100% identity) | GAGNNNNNNNTGGC | M.CfrMH16II |
| 24390 | S | S.RplWA001ORF24580P (100% identity) | GAGNNNNNNNTGGC | S.CfrMH16II |
| 24395 | ABC transporter | |||
| 25655 | endoribonuclease SymE | |||
| 25660 | S | S.CfrF2021ORF21185P (100% identity) | CACNNNNNNNTGCC | S.CfrMH16III |
| 25665 | M | M.CfrF2021ORF21185P (100% identity) | CACNNNNNNNTGCC | M.CfrMH16III |
| 25670 | R | CfrF2021ORF21185P (100% identity) | CACNNNNNNNTGCC | CfrMH16IIIP |
| 25675 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4630 | DUF3850 domain-containing protein | |||
| 4635 | M | M.CyoL6ORF16030P (99% identity) | M.CfrMH16ORF4635P | |
| 4640 | 70 aa hypothetical protein | |||
| 6470 | GntR family transcriptional regulator | |||
| 6475 | M | M.CfrH1ORF22475P (95% identity) | M.CfrMH16ORF6475P | |
| 6480 | RusA family crossover junction | |||
| 6500 | 284 aa hypothetical protein | |||
| 6505 | M | M.Eco9094ORF1189P (49% identity) | M.CfrMH16ORF6505P | |
| 6510 | phage tail assembly protein | |||
| 10100 | 66 aa hypothetical protein | |||
| 10105 | M | M.Cfr965ORF10950P (99% identity) | M.CfrMH16ORF10105P | |
| 10110 | 85 aa hypothetical protein | |||
| 11715 | RusA family crossover junction | |||
| 11720 | M | M.Cfr9750ORF3057P (97% identity) | M.CfrMH16ORF11720P | |
| 11725 | GntR family transcriptional regulator | |||
| 12340 | drug/metabolite exporter YedA | |||
| 12345 | V | V.CspS39ORF13780P (100% identity) | CCWGG | V.CfrMH16VP |
| 12350 | M | M.CfrR47ORF22570P (99% identity) | CCWGG | M.CfrMH16V |
| 12355 | phosphohydrolase | |||
| 18745 | BREX system P-loop protein BrxC | |||
| 18750 | RM | Cfr126ORF19905P (100% identity) | CTAAAG | CfrMH16VI |
| 18755 | ABC transporter ATP-binding protein | |||
| 19800 | Fis family transcriptional regulator | |||
| 19805 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.CfrMH16IV |
| 19810 | DUF2556 domain-containing protein | |||
| 20370 | ribulose-phosphate 3-epimerase | |||
| 20375 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrMH16DamP |
| 20380 | cell division protein DamX | |||
| plasmid pUMH16 | ||||
| 26060 | 73 aa hypothetical protein | |||
| 26065 | M | M.Sen74091ORF23005P (100% identity) | M.CfrMH16ORF26065P | |
| 26070 | DNA breaking-rejoining protein | |||