Salmonella enterica subsp. enterica 10TTU468x |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica 10TTU468x RM systems
Ref: Bugarel,M. et al. unpublished
REBASE ref # 27600
Complete sequence: 4,985,863 bp
GenBank #: CP032814
REBASE acronym: Sen468
Org_num: 15703
All begin D8S84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22035 | 322 aa hypothetical protein | |||
| 22040 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | Sen468ORF4710P |
| 22045 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.Sen468ORF4710P |
| 22050 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.Sen468ORF4710P |
| 22055 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.Sen468DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 domain-containing protein | |||
| 2290 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen468ORF23180P |
| 2295 | Fis family transcriptional regulator | |||
| 5670 | zinc ribbon domain-containing protein | |||
| 5675 | M | M.SenXB08ORF5455P (100% identity) | M.Sen468ORF5675P | |
| 5680 | 470 aa hypothetical protein | |||
| 5730 | DUF3850 domain-containing protein | |||
| 5735 | M | M.SenU1590ORF19885P (100% identity) | GATC | M.Sen468ORF19930P |
| 5740 | replication endonuclease | |||
| 5930 | TraR/DksA family transcriptional regulator | |||
| 5935 | M | M.SenU1590ORF19690P (100% identity) | GATC | M.Sen468ORF19735P |
| 5940 | replication endonuclease | |||
| 10195 | phosphohydrolase | |||
| 10200 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.Sen468DcmP |
| 10205 | V | V.StyUK1DcmP (100% identity) | V.Sen468DcmP | |
| 10210 | drug/metabolite exporter YedA | |||
| 15910 | lysis protein | |||
| ??? | M | M.SenU1590ORF11730P (100% identity) | M.Sen468ORF11740P | |
| 15920 | lysozyme | |||
| 15960 | methyltransferase | |||
| 15965 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.Sen468ORF11685P |
| 15970 | 82 aa hypothetical protein | |||
| 22210 | 75 aa hypothetical protein | |||
| 22215 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.Sen468ORF4545P |
| 22220 | histidine kinase | |||
| 22225 | 607 aa hypothetical protein | |||
| 22230 | R | SenXB08ORF19940P (100% identity) | Sen468ORF22230P | |
| 22235 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19675 | 33 aa hypothetical protein | |||
| 19680 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen468ORF6970P |
| 19685 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.Sen468ORF6970P |
| 19690 | MFS transporter | |||