Pectobacterium parmentieri IFB5408 |
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Putative Pectobacterium parmentieri IFB5408 RM systems
Ref: Zoledowska,S. unpublished
REBASE ref # 27593
Complete sequence: 5,022,017 bp
GenBank #: CP026977
REBASE acronym: Ppa5408
Org_num: 31432
All begin C5E17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2515 | DUF4102 domain-containing protein | |||
| 2520 | M | M.Pwa1AORF16135P (100% identity) | M.Ppa5408ORF2520P | |
| 2525 | S | S.Pwa1AORF16135P (100% identity) | S.Ppa5408ORF2520P | |
| 2530 | R | Pwa1AORF16135P (100% identity) | Ppa5408ORF2520P | |
| 2535 | hydroxyacid dehydrogenase | |||
| 8115 | SIR2 family protein | |||
| 8120 | M | M.Hpa230I (97% identity) | M.Ppa5408ORF8120P | |
| 8125 | S | S.SmaLY1ORFDP (71% identity) | S.Ppa5408ORF8120P | |
| 8130 | R | Sma332IP (97% identity) | Ppa5408ORF8120P | |
| 8135 | IS1595 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2730 | 446 aa hypothetical protein | |||
| 2735 | R | Pwa1AORF15930P (100% identity) | Ppa5408ORF2735P | |
| 2740 | DUF1615 domain-containing protein | |||
| 4130 | XRE family transcriptional regulator | |||
| 4135 | R | Pwa1AORF14510P (100% identity) | Ppa5408ORF4135P | |
| 4140 | type VI secretion system tube protein Hcp | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10665 | recombination-associated protein RdgC | |||
| 10670 | M | M.Pwa1AORF7980P (100% identity) | M.Ppa5408ORF10670P | |
| 10675 | DUF1367 domain-containing protein | |||
| 20560 | ribulose-phosphate 3-epimerase | |||
| 20565 | M | M.PwaDamP (100% identity) | M.Ppa5408ORF20565P | |
| 20570 | SPOR domain-containing protein | |||