Pseudomonas species DY-1 |
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Putative Pseudomonas species DY-1 RM systems
Ref: Song,F. unpublished
REBASE ref # 27506
Complete sequence: 5,886,398 bp
GenBank #: CP032616
REBASE acronym: PspDY1
Org_num: 31284
All begin D6Z43_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9370 | DUF4102 domain-containing protein | |||
| 9375 | M | M.PpuCSV86ORFAP (72% identity) | M.PspDY1ORF9375P | |
| 9380 | 243 aa hypothetical protein | |||
| 9830 | 97 aa hypothetical protein | |||
| 9835 | M | M.PaeSE24ORF9600P (81% identity) | M.PspDY1ORF9835P | |
| 9840 | 103 aa hypothetical protein | |||
| 9840 | 103 aa hypothetical protein | |||
| 9845 | M | M.Pla190ORF9700P (52% identity) | M.PspDY1ORF9845P | |
| 9850 | 95 aa hypothetical protein | |||
| 16170 | 179 aa hypothetical protein | |||
| 16175 | M | M.Psp66ORF1320P (93% identity) | M.PspDY1ORF16175P | |
| 16180 | 86 aa hypothetical protein | |||
| 16390 | 208 aa hypothetical protein | |||
| 16395 | M | M.Psp046ORFAP (79% identity) | M.PspDY1ORF16395P | |
| 16400 | site-specific integrase | |||
| 24460 | type II toxin-antitoxin system Phd/YefM family | |||
| 24465 | M | M.PmeCPS5ORF6735P (70% identity) | M.PspDY1ORF24465P | |
| 24470 | V | V.PmeCPS5ORF6735P (43% identity) | V.PspDY1ORF24465P | |
| 24475 | 420 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17510 | nuclease | |||
| 17515 | R | PspD7DMrrP (96% identity) | PspDY1Mrr2P | |
| 17520 | 705 aa hypothetical protein | |||
| 24470 | very short patch repair endonuclease | |||
| 24475 | R | Pae84950McrCP (49% identity) | PspDY1McrCP | |
| 24480 | R | PpuR51McrBP (62% identity) | PspDY1McrBP | |
| 24485 | 349 aa hypothetical protein | |||