Vibrio parahaemolyticus FORC_072 |
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Putative Vibrio parahaemolyticus FORC_072 RM systems
Ref: Lee,J.-H. et al. unpublished
REBASE ref # 27572
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,402,675 bp | CP023472 |
| chromosome 2: | 1,785,563 bp | CP023473 |
REBASE acronym: Vpa072
Org_num: 31327
All begin FORC72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1676 | 706 aa hypothetical protein | |||
| 1677 | R | VpaLVP1ORF17955P (98% identity) | Vpa072ORF1681P | |
| 1678 | 663 aa hypothetical protein | |||
| 1679 | 470 aa hypothetical protein | |||
| 1680 | S | S.Vvu16ORF1865P (71% identity) | S.Vpa072ORF1681P | |
| 1681 | M | M.Vpe25916ORFBP (89% identity) | M.Vpa072ORF1681P | |
| 1682 | 688 aa hypothetical protein | |||
| chromosome 2 | ||||
| 3958 | 386 aa hypothetical protein | |||
| 3959 | S | S.Vpa4557ORF2985P (99% identity) | S.Vpa072ORF3960P | |
| 3960 | M | M.Vpa4557ORF2985P (100% identity) | M.Vpa072ORF3960P | |
| 3961 | R | Vpa4557ORF2985P (99% identity) | Vpa072ORF3960P | |
| 3962 | 188 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 279 | DamX, an inner membrane protein involved in bile | |||
| 280 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa072DamP |
| 281 | Ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2424 | Mobile element protein | |||
| 2425 | R | VpaV493McrC2P (99% identity) | Vpa072McrCP | |
| ??? | R | VpaVP157McrBP (96% identity) | Vpa072McrBP | |
| 2428 | Mobile element protein | |||
| chromosome 2 | ||||
| 3952 | Phage integrase | |||
| 3953 | R | Vpa4557McrCP (99% identity) | Vpa072McrC2P | |
| 3954 | R | Vpa51552McrBP (99% identity) | Vpa072McrB2P | |
| 3955 | 376 aa hypothetical protein | |||