Clostridioides difficile 020477 |
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Putative Clostridioides difficile 020477 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 27515
Complete sequence: 4,144,005 bp
GenBank #: CP028524
REBASE acronym: Cdi20477
Org_num: 31214
All begin DA418_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15085 | DUF262 domain-containing protein | |||
| 15090 | R | CdiS122ORF2565P (100% identity) | TAGNNNNNRTGAA | Cdi20477IP |
| 15095 | 142 aa hypothetical protein | |||
| 15100 | nucleotidyltransferase domain-containing | |||
| 15105 | 102 aa hypothetical protein | |||
| 15110 | S | S.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | S.Cdi20477I |
| 15115 | M | M.Pdi30ORF18320P (100% identity) | TAGNNNNNRTGAA | M.Cdi20477I |
| 15120 | ketose-bisphosphate aldolase | |||
| 15640 | 111 aa hypothetical protein | |||
| 15645 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | Cdi20477IIP |
| 15650 | 423 aa hypothetical protein | |||
| 15655 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.Cdi20477II |
| 15660 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.Cdi20477II |
| 15665 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 705 | 38 aa hypothetical protein | |||
| 710 | M | M.CdiS122ORF7470P (100% identity) | M.Cdi20477ORF710P | |
| 715 | 69 aa hypothetical protein | |||
| 13795 | patatin-like phospholipase family protein | |||
| 13800 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20477IV |
| 13805 | Rrf2 family transcriptional regulator | |||
| 15480 | class B sortase | |||
| 15485 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi20477ORF15485P |
| 15490 | 0 aa hypothetical protein | |||
| 15565 | 383 aa hypothetical protein | |||
| 15570 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M1.Cdi20477III |
| 15575 | M | M2.Pdi30ORF18765P (100% identity) | CATCG | M2.Cdi20477III |
| 15580 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10065 | AAA family ATPase | |||
| 10070 | R | Pdi30McrCP (100% identity) | Cdi20477McrCP | |
| 10075 | R | Pdi30McrBP (100% identity) | Cdi20477McrBP | |
| 10080 | cell division protein | |||