Salmonella enterica subsp. enterica serovar Fresno USMARC-69835 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Fresno USMARC-69835 RM systems
Ref: Haley,B.J. et al. unpublished
REBASE ref # 27559
| Sequence length: | GenBank #: | |
| Chromosome: | 4,732,430 bp | CP032444 |
| plasmid pSFR1-USMARC-69835: | 89,737 bp | CP032445 |
REBASE acronym: Sen69835
Org_num: 31306
All begin DZA58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20400 | restriction endonuclease | |||
| 20405 | R | Sen6218ORF19390P (100% identity) | CRTANNNNNNNGTCY | Sen69835IIIP |
| 20410 | M | M.Sen6218ORF19390P (100% identity) | CRTANNNNNNNGTCY | M.Sen69835III |
| 20415 | S | S.Sen6218ORF19390P (100% identity) | CRTANNNNNNNGTCY | S.Sen69835III |
| 20420 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1985 | cell division protein DamX | |||
| 1990 | M | M.StyTDamP (100% identity) | GATC | M.Sen69835Dam |
| 1995 | ribulose-phosphate 3-epimerase | |||
| 2490 | DUF2556 domain-containing protein | |||
| 2495 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen69835II |
| 2500 | Fis family transcriptional regulator | |||
| 5875 | IS30 family transposase | |||
| 5880 | R | Sen6218ORF5615P (100% identity) | Sen69835ORF5885P | |
| 5885 | M | M.SenCer87ORF1735P (100% identity) | GCCGGC | M.Sen69835ORF5885P |
| 5890 | phage tail tape measure protein | |||
| 14500 | drug/metabolite exporter YedA | |||
| 14505 | V | V.StyUK1DcmP (100% identity) | V.Sen69835DcmP | |
| 14510 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen69835DcmP |
| 14515 | phosphohydrolase | |||
| 20560 | YebC/PmpR family DNA-binding transcriptional | |||
| 20565 | R | Sen6218ORF19525P (100% identity) | Sen69835ORF20565P | |
| 20570 | 87 aa hypothetical protein | |||
| 20820 | conjugal transfer protein TraG | |||
| 20825 | M | M.Sen6218DndBP (100% identity) | M.Sen69835DndBP | |
| 20830 | DNA phosphorothioation system sulfurtransferase | |||
| 20825 | DNA sulfur modification protein DndB | |||
| 20830 | M | M.Sen6218DndCP (100% identity) | M.Sen69835DndCP | |
| 20835 | DNA sulfur modification protein DndD | |||
| 20830 | DNA phosphorothioation system sulfurtransferase | |||
| 20835 | M | M.Sen6218DndDP (100% identity) | M.Sen69835DndDP | |
| 20840 | DNA sulfur modification protein DndE | |||
| 20835 | DNA sulfur modification protein DndD | |||
| 20840 | M | M.Sen6218DndEP (100% identity) | M.Sen69835DndEP | |
| 20845 | DUF262 domain-containing protein | |||
| plasmid pSFR1-USMARC-69835 | ||||
| 24070 | 102 aa hypothetical protein | |||
| 24075 | M | M.StyR64ORFAP (100% identity) | M.Sen69835ORF24075P | |
| 24080 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18000 | 33 aa hypothetical protein | |||
| 18005 | R | Sen6218ORF17120P (100% identity) | CAGAG | Sen69835IP |
| 18010 | M | M.Sen6218ORF17120P (100% identity) | CAGAG | M.Sen69835I |
| 18015 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20395 | BrnT family toxin | |||
| 20400 | R | Sen6218MrrP (100% identity) | Sen69835MrrP | |
| 20405 | type I restriction-modification system | |||