Salmonella enterica subsp. enterica serovar Dublin USMARC-69840 |
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Putative Salmonella enterica subsp. enterica serovar Dublin USMARC-69840 RM systems
Ref: Harhay,D.M. et al. unpublished
REBASE ref # 27558
Complete sequence: 4,844,133 bp
GenBank #: CP032446
REBASE acronym: Sen69840
Org_num: 31305
All begin DZA57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21495 | 78 aa hypothetical protein | |||
| 21500 | S | S2.Ssp3CORF11555P (100% identity) | S.Sen69840ORF21505P | |
| 21505 | M | M.Sen69838ORF21955P (100% identity) | M.Sen69840ORF21505P | |
| 21510 | restriction endonuclease | |||
| 21510 | restriction endonuclease | |||
| 21515 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen69840ORF21515P |
| 21520 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen69840ORF21515P |
| 21525 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen69840ORF21515P |
| 21530 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2005 | cell division protein DamX | |||
| 2010 | M | M.StyTDamP (100% identity) | GATC | M.Sen69840DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2510 | DUF2556 domain-containing protein | |||
| 2515 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen69840II |
| 2520 | Fis family transcriptional regulator | |||
| 5900 | TraR/DksA family transcriptional regulator | |||
| 5905 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen69840ORF5905P |
| 5910 | replication endonuclease | |||
| 9665 | 249 aa hypothetical protein | |||
| 9670 | M | M.Ssp3CORF22905P (100% identity) | M.Sen69840ORF9670P | |
| 9675 | ead/Ea22-like family protein | |||
| 9750 | PerC family transcriptional regulator | |||
| 9755 | M | M.Ssp3CORF22825P (100% identity) | M.Sen69840ORF9755P | |
| 9760 | RusA family crossover junction | |||
| 14915 | drug/metabolite exporter YedA | |||
| 14920 | V | V.StyUK1DcmP (100% identity) | V.Sen69840DcmP | |
| 14925 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen69840DcmP |
| 14930 | phosphohydrolase | |||
| 15760 | DUF550 domain-containing protein | |||
| 15765 | M | M.Ssp3CORF17125P (100% identity) | M.Sen69840ORF15765P | |
| 15770 | ead/Ea22-like family protein | |||
| 21665 | 59 aa hypothetical protein | |||
| 21670 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen69840ORF21670P |
| 21675 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19230 | 33 aa hypothetical protein | |||
| 19235 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen69840IP |
| 19240 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen69840I |
| 19245 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21505 | restriction endonuclease subunit M | |||
| 21510 | R | Ssp3CMrrP (100% identity) | Sen69840MrrP | |
| 21515 | DNA methyltransferase | |||