Ralstonia solanacearum SFC |
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Putative Ralstonia solanacearum SFC RM systems
Ref: Silva,J.R. et al. unpublished
REBASE ref # 27549
Complete sequence: 3,656,700 bp
GenBank #: CP026092
REBASE acronym: RsoSFC
Org_num: 31292
All begin C2L97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 225 | Rrf2 family transcriptional regulator | |||
| 230 | M | M.Rso489ORF455P (100% identity) | M.RsoSFCORF230P | |
| 235 | 286 aa hypothetical protein | |||
| 240 | R | Rso2570ORF230P (100% identity) | RsoSFCORF230P | |
| 245 | sensor histidine kinase | |||
| 24645 | helix-turn-helix domain-containing protein | |||
| 24650 | R | Rso2570ORF24630P (100% identity) | RsoSFCORF24660P | |
| 24655 | S | S.Rso2570ORF24630P (100% identity) | S.RsoSFCORF24660P | |
| 24660 | M | M2.Rso2570ORF24630P (100% identity) | M2.RsoSFCORF24660P | |
| 24665 | M | M1.Rso2570ORF24630P (100% identity) | M1.RsoSFCORF24660P | |
| 24670 | WYL domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24460 | type II toxin-antitoxin system RelE/ParE family | |||
| 1145 | M | M1.Rso2570ORF1150P (100% identity) | M1.RsoSFCORF1145P | |
| 1150 | M | M2.Rso2570ORF1150P (100% identity) | M2.RsoSFCORF1145P | |
| 24465 | site-specific DNA-methyltransferase | |||
| 1150 | site-specific DNA-methyltransferase | |||
| 24465 | M | M1.Rso2570ORF24440P (100% identity) | M1.RsoSFCORF24465P | |
| 24470 | M | M2.Rso2570ORF24440P (100% identity) | M2.RsoSFCORF24465P | |
| 24475 | 125 aa hypothetical protein | |||
| 24900 | Com family DNA-binding transcriptional | |||
| 24905 | M | M.Rso2570ORF24870P (100% identity) | M.RsoSFCORF24905P | |
| 24915 | 169 aa hypothetical protein | |||
| 7105 | tryptophan synthase subunit beta | |||
| 7110 | M | M.Rso2570ORF7110P (100% identity) | GTWWAC | M.RsoSFCORF7110P |
| 7115 | tryptophan synthase subunit alpha | |||
| 7485 | 149 aa hypothetical protein | |||
| ??? | RM | RsoUW70ORFAP (100% identity) | RsoSFCORF7490P | |
| 7495 | Fis family transcriptional regulator | |||
| 12325 | 126 aa hypothetical protein | |||
| 12330 | M | M2.RsoUW70ORFCP (100% identity) | M1.RsoSFCORF12330P | |
| 12335 | M | M1.RsoUW70ORFCP (84% identity) | M2.RsoSFCORF12330P | |
| 12340 | 135 aa hypothetical protein | |||
| 26370 | type II toxin-antitoxin system VapC family | |||
| 1265 | M | M.Rso2570ORF1270P (100% identity) | M.RsoSFCORF1265P | |
| 26375 | H-NS histone family protein | |||
| 13765 | IS3 family transposase | |||
| 13770 | RM | Rso82ORF2804P (100% identity) | RsoSFCORF13770P | |
| 13775 | ImmA/IrrE family metallo-endopeptidase | |||