Salmonella enterica subsp. enterica serovar Dublin CVM 22429 |
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Putative Salmonella enterica subsp. enterica serovar Dublin CVM 22429 RM systems
Ref: Zhao,S. unpublished
REBASE ref # 27556
| Sequence length: | GenBank #: | |
| Chromosome: | 4,868,095 bp | CP032396 |
| plasmid p22429: | 329,264 bp | CP032397 |
REBASE acronym: Sen22429
Org_num: 31298
All begin D5G01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10435 | DUF91 domain-containing protein | |||
| 10440 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen22429ORF10450P |
| 10445 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen22429ORF10450P |
| 10450 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen22429ORF10450P |
| 10455 | restriction endonuclease | |||
| 10455 | restriction endonuclease | |||
| 10460 | M | M.Sen69840ORF21505P (100% identity) | M.Sen22429ORF10460P | |
| 10465 | S | S2.Ssp3CORF11555P (100% identity) | S.Sen22429ORF10460P | |
| 10470 | 78 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1235 | replication endonuclease | |||
| 1240 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen22429ORF1240P |
| 1245 | TraR/DksA family transcriptional regulator | |||
| 4635 | Fis family transcriptional regulator | |||
| 4640 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22429ORF4640P |
| 4645 | DUF2556 domain-containing protein | |||
| 5145 | ribulose-phosphate 3-epimerase | |||
| 5150 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen22429DamP |
| 5155 | cell division protein DamX | |||
| 10285 | IS3 family transposase | |||
| 10290 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen22429ORF10290P |
| 10295 | 59 aa hypothetical protein | |||
| 16230 | ead/Ea22-like family protein | |||
| 16235 | M | M.Ssp3CORF17125P (100% identity) | M.Sen22429ORF16235P | |
| 16240 | DUF550 domain-containing protein | |||
| 17135 | phosphohydrolase | |||
| 17140 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen22429DcmP |
| 17145 | V | V.StyUK1DcmP (100% identity) | V.Sen22429DcmP | |
| 17150 | drug/metabolite exporter YedA | |||
| 22335 | RusA family crossover junction | |||
| 22340 | M | M.Ssp3CORF22825P (100% identity) | M.Sen22429ORF22340P | |
| 22345 | PerC family transcriptional regulator | |||
| 22420 | ead/Ea22-like family protein | |||
| 22425 | M | M.Ssp3CORF22905P (100% identity) | M.Sen22429ORF22425P | |
| 22430 | 249 aa hypothetical protein | |||
| plasmid p22429 | ||||
| 25760 | 100 aa hypothetical protein | |||
| 25765 | M | M.YrupYR1ORFCP (100% identity) | M.Sen22429ORF25765P | |
| 25770 | 158 aa hypothetical protein | |||
| 26225 | 73 aa hypothetical protein | |||
| 26230 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Sen22429ORF26230P |
| 26235 | 0 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12735 | MFS transporter | |||
| 12740 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen22429ORF12740P |
| 12745 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen22429ORF12740P |
| 12750 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10450 | DNA methyltransferase | |||
| ??? | R | SenSE10MrrP (100% identity) | Sen22429MrrP | |
| 10460 | restriction endonuclease subunit M | |||
| 10450 | DNA methyltransferase | |||
| 10455 | R | Ssp3CMrrP (100% identity) | Sen22429Mrr2P | |
| 10460 | restriction endonuclease subunit M | |||