Salmonella enterica subsp. enterica serovar Dublin CVM 34981 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Dublin CVM 34981 RM systems
Ref: Zhao,S. unpublished
REBASE ref # 27556
| Sequence length: | GenBank #: | |
| Chromosome: | 4,846,886 bp | CP032390 |
| plasmid p34981_1: | 146,176 bp | CP032391 |
REBASE acronym: Sen34981
Org_num: 31300
All begin D5F99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7805 | DUF91 domain-containing protein | |||
| 7810 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen34981ORF7820P |
| 7815 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen34981ORF7820P |
| 7820 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen34981ORF7820P |
| 7825 | restriction endonuclease | |||
| 7825 | restriction endonuclease | |||
| 7830 | M | M.Sen69840ORF21505P (100% identity) | M.Sen34981ORF7830P | |
| 7835 | S | S2.Ssp3CORF11555P (100% identity) | S.Sen34981ORF7830P | |
| 7840 | 78 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2045 | Fis family transcriptional regulator | |||
| 2050 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen34981ORF2050P |
| 2055 | DUF2556 domain-containing protein | |||
| 2555 | ribulose-phosphate 3-epimerase | |||
| 2560 | M | M.StyTDamP (100% identity) | GATC | M.Sen34981DamP |
| 2565 | cell division protein DamX | |||
| 7655 | IS3 family transposase | |||
| 7660 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen34981ORF7660P |
| 7665 | 59 aa hypothetical protein | |||
| 13615 | ead/Ea22-like family protein | |||
| 13620 | M | M.Ssp3CORF17125P (100% identity) | M.Sen34981ORF13620P | |
| 13625 | DUF550 domain-containing protein | |||
| 14465 | phosphohydrolase | |||
| 14470 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen34981DcmP |
| 14475 | V | V.StyUK1DcmP (100% identity) | V.Sen34981DcmP | |
| 14480 | drug/metabolite exporter YedA | |||
| 19655 | RusA family crossover junction | |||
| 19660 | M | M.Ssp3CORF22825P (100% identity) | M.Sen34981ORF19660P | |
| 19665 | PerC family transcriptional regulator | |||
| 19740 | ead/Ea22-like family protein | |||
| 19745 | M | M.Ssp3CORF22905P (100% identity) | M.Sen34981ORF19745P | |
| 19750 | 249 aa hypothetical protein | |||
| 23525 | replication endonuclease | |||
| 23530 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen34981ORF23530P |
| 23535 | TraR/DksA family transcriptional regulator | |||
| plasmid p34981_1 | ||||
| 25235 | 100 aa hypothetical protein | |||
| 25240 | M | M.YrupYR1ORFCP (100% identity) | M.Sen34981ORF25240P | |
| 25245 | 158 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10105 | MFS transporter | |||
| 10110 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen34981ORF10110P |
| 10115 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen34981ORF10110P |
| 10120 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7820 | DNA methyltransferase | |||
| ??? | R | SenSE10MrrP (100% identity) | Sen34981MrrP | |
| 7830 | restriction endonuclease subunit M | |||
| 7820 | DNA methyltransferase | |||
| 7825 | R | Ssp3CMrrP (100% identity) | Sen34981Mrr2P | |
| 7830 | restriction endonuclease subunit M | |||