Salmonella enterica subsp. enterica serovar Dublin CVM 22453 |
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Putative Salmonella enterica subsp. enterica serovar Dublin CVM 22453 RM systems
Ref: Zhao,S. unpublished
REBASE ref # 27556
| Sequence length: | GenBank #: | |
| Chromosome: | 4,858,438 bp | CP032393 |
| plasmid p22453_1: | 164,900 bp | CP032395 |
REBASE acronym: Sen22453
Org_num: 31299
All begin D5G00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24515 | 78 aa hypothetical protein | |||
| 24520 | S | S2.Ssp3CORF11555P (100% identity) | S.Sen22453ORF24525P | |
| 24525 | M | M.Sen69840ORF21505P (100% identity) | M.Sen22453ORF24525P | |
| 24530 | restriction endonuclease | |||
| 24530 | restriction endonuclease | |||
| 24535 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen22453ORF24535P |
| 24540 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen22453ORF24535P |
| 24545 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen22453ORF24535P |
| 24550 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4930 | cell division protein DamX | |||
| 4935 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen22453DamP |
| 4940 | ribulose-phosphate 3-epimerase | |||
| 5440 | DUF2556 domain-containing protein | |||
| 5445 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22453ORF5445P |
| 5450 | Fis family transcriptional regulator | |||
| 8845 | TraR/DksA family transcriptional regulator | |||
| 8850 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen22453ORF8850P |
| 8855 | replication endonuclease | |||
| 12625 | 249 aa hypothetical protein | |||
| 12630 | M | M.Ssp3CORF22905P (100% identity) | M.Sen22453ORF12630P | |
| 12635 | ead/Ea22-like family protein | |||
| 12710 | PerC family transcriptional regulator | |||
| 12715 | M | M.Ssp3CORF22825P (100% identity) | M.Sen22453ORF12715P | |
| 12720 | RusA family crossover junction | |||
| 17895 | drug/metabolite exporter YedA | |||
| 17900 | V | V.StyUK1DcmP (100% identity) | V.Sen22453DcmP | |
| 17905 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen22453DcmP |
| 17910 | phosphohydrolase | |||
| 18755 | DUF550 domain-containing protein | |||
| 18760 | M | M.Ssp3CORF17125P (100% identity) | M.Sen22453ORF18760P | |
| 18765 | ead/Ea22-like family protein | |||
| 24690 | 59 aa hypothetical protein | |||
| 24695 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen22453ORF24695P |
| 24700 | IS3 family transposase | |||
| plasmid p22453_1 | ||||
| 25810 | 73 aa hypothetical protein | |||
| 25815 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Sen22453ORF25815P |
| 25820 | 0 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22245 | 33 aa hypothetical protein | |||
| 22250 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen22453ORF22255P |
| 22255 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen22453ORF22255P |
| 22260 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24525 | restriction endonuclease subunit M | |||
| ??? | R | Ssp3CMrrP (88% identity) | Sen22453MrrP | |
| 24535 | DNA methyltransferase | |||
| 24525 | restriction endonuclease subunit M | |||
| 24530 | R | Ssp3CMrrP (100% identity) | Sen22453Mrr2P | |
| 24535 | DNA methyltransferase | |||