Citrobacter freundii AR_0116 |
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Putative Citrobacter freundii AR_0116 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 23638
| Sequence length: | GenBank #: | |
| Chromosome: | 5,121,015 bp | CP032184 |
| plasmid unnamed1: | 260,460 bp | CP032179 |
| plasmid unnamed2: | 137,578 bp | CP032180 |
| plasmid unnamed3: | 81,323 bp | CP032181 |
| plasmid unnamed4: | 49,806 bp | CP032182 |
| plasmid unnamed5: | 121,983 bp | CP032183 |
REBASE acronym: Cfr116
Org_num: 31112
All begin AM363_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17990 | M48 family peptidase | |||
| 17995 | R | CfrF3221ORF11240P (100% identity) | GATGNNNNNGTT | Cfr116IP |
| 18000 | YecA family protein | |||
| 18005 | S | S.KpnKLZTORF27160P (100% identity) | GATGNNNNNGTT | S.Cfr116I |
| 18010 | M | M.CfrF3221ORF11240P (100% identity) | GATGNNNNNGTT | M.Cfr116I |
| 18015 | oxidoreductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14540 | DUF2441 domain-containing protein | |||
| 14545 | M | M.Kpn569ORF24840P (100% identity) | M.Cfr116ORF14545P | |
| 14550 | 177 aa hypothetical protein | |||
| 18405 | drug/metabolite exporter YedA | |||
| 18410 | V | V.CyoL6ORF9385P (100% identity) | V.Cfr116ORF18415P | |
| 18415 | M | M.CfrF3221ORF10905P (100% identity) | M.Cfr116ORF18415P | |
| 18420 | phosphohydrolase | |||
| 21950 | DEAD/DEAH box helicase | |||
| 21955 | RM | CfrF3221ORF7300P (100% identity) | Cfr116ORF21955P | |
| 21960 | 287 aa hypothetical protein | |||
| 26060 | site-specific integrase | |||
| 26065 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr116ORF26065P |
| 26070 | DUF2556 domain-containing protein | |||
| 26625 | ribulose-phosphate 3-epimerase | |||
| 26630 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr116DamP |
| 26635 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 80 | 273 aa hypothetical protein | |||
| 85 | M | M1.PspNIH2ORF20995P (100% identity) | M.Cfr116ORF85P | |
| 90 | DNA-binding protein | |||
| 475 | 203 aa hypothetical protein | |||
| 480 | M | M.SenF8025ORFAP (86% identity) | M.Cfr116ORF480P | |
| 485 | 102 aa hypothetical protein | |||
| 740 | thermonuclease family protein | |||
| 745 | M | M.SenZC055ORF26240P (100% identity) | M.Cfr116ORF745P | |
| 750 | 56 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 2010 | 115 aa hypothetical protein | |||
| 2015 | M | M.CspLY1ORF910P (100% identity) | M.Cfr116ORF2015P | |
| 2020 | 73 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 2335 | 73 aa hypothetical protein | |||
| 2340 | M | M.Kqu645ORF56660P (100% identity) | M.Cfr116ORF2340P | |
| 2345 | 111 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 2850 | 207 aa hypothetical protein | |||
| 2855 | M | M.Csp524ORF25915P (97% identity) | M.Cfr116ORF2855P | |
| 2860 | nucleoside 2-deoxyribosyltransferase | |||
| 2875 | 103 aa hypothetical protein | |||
| 2880 | M | M.Csp524ORF25885P (99% identity) | M.Cfr116ORF2880P | |
| 2885 | 75 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 3475 | 76 aa hypothetical protein | |||
| 3480 | M | M.SphSSU5ORF88P (96% identity) | M.Cfr116ORF3480P | |
| 3485 | 308 aa hypothetical protein | |||