Escherichia coli AR_0013 |
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Putative Escherichia coli AR_0013 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 23638
| Sequence length: | GenBank #: | |
| Chromosome: | 5,410,835 bp | CP032204 |
| plasmid unnamed: | 70,275 bp | CP032205 |
REBASE acronym: Eco13
Org_num: 31117
All begin AM340_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2420 | DUF262 domain-containing protein | |||
| 2425 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | Eco13IIP |
| 2430 | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.Eco13II |
| 2435 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.Eco13II |
| 2440 | endoribonuclease SymE | |||
| 2665 | 128 aa hypothetical protein | |||
| 2670 | M | M.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | M.Eco13III |
| 2675 | S | S.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | S.Eco13III |
| 2680 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8965 | cell division protein DamX | |||
| 8970 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco13DamP |
| 8975 | ribulose-phosphate 3-epimerase | |||
| 9550 | DUF2556 domain-containing protein | |||
| 9555 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco13ORF9555P |
| 9560 | Fis family transcriptional regulator | |||
| 13360 | 257 aa hypothetical protein | |||
| 13365 | M | M.Sso8033ORF3755P (100% identity) | M.Eco13ORF13365P | |
| 13370 | R | Sso8033ORF3755P (99% identity) | Eco13ORF13365P | |
| 13375 | endolysin | |||
| 18695 | TrmB family transcriptional regulator | |||
| 18700 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco13ORF18700P |
| 18720 | 73 aa hypothetical protein | |||
| 22860 | RusA family crossover junction | |||
| 22865 | M | M.EcoSCU482ORF21135P (100% identity) | GATC | M.Eco13ORF22865P |
| 22870 | PerC family transcriptional regulator | |||
| 23275 | replication endonuclease | |||
| 23280 | M | M.EcoWH333ORF4405P (100% identity) | TGGCCA | M.Eco13I |
| 23285 | AAA family ATPase | |||
| 23705 | EamA family transporter | |||
| 23710 | V | V.SflC32DcmP (74% identity) | V.Eco13DcmP | |
| 23715 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.Eco13DcmP |
| 23720 | phosphohydrolase | |||
| plasmid unnamed | ||||
| 28395 | 97 aa hypothetical protein | |||
| 28400 | M | M.Ssop356ORFAP (100% identity) | M.Eco13ORF28400P | |
| 28405 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2650 | HNH endonuclease | |||
| 2655 | R | EcoSP46McrBP (99% identity) | Eco13McrBP | |
| 2660 | R | EcoSP5McrCP (100% identity) | Eco13McrCP | |
| 2665 | 128 aa hypothetical protein | |||