Escherichia coli AR_0086 |
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Putative Escherichia coli AR_0086 RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 23638
| Sequence length: | GenBank #: | |
| Chromosome: | 5,107,215 bp | CP032201 |
| plasmid unnamed1: | 140,509 bp | CP032202 |
| plasmid unnamed2: | 41,865 bp | CP032203 |
REBASE acronym: Eco086
Org_num: 31116
All begin AM465_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25265 | 267 aa hypothetical protein | |||
| 25270 | type I restriction endonuclease subunit R | |||
| 25265 | 267 aa hypothetical protein | |||
| 25270 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco086IIP |
| 25275 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco086II |
| 25280 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco086II |
| 25285 | 61 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 480 | 64 aa hypothetical protein | |||
| 485 | M | M.Ecoppa6ORF4450P (100% identity) | M.Eco086ORF485P | |
| 490 | 67 aa hypothetical protein | |||
| 515 | LexA family transcriptional regulator | |||
| 520 | M | M.Sso30ORF925P (100% identity) | GATC | M.Eco086ORF520P |
| 525 | PerC family transcriptional regulator | |||
| 1015 | restriction endonuclease | |||
| 1020 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco086IIIP |
| 1025 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco086IIIP |
| 1030 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.Eco086III |
| 1035 | IS3 family transposase | |||
| 6620 | cell division protein DamX | |||
| 6625 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco086DamP |
| 6630 | ribulose-phosphate 3-epimerase | |||
| 7250 | DUF2556 domain-containing protein | |||
| 7255 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco086ORF7255P |
| 7260 | Fis family transcriptional regulator | |||
| 11845 | DUF1382 family protein | |||
| 11850 | M | M.EfeC18ORF5895P (100% identity) | M.Eco086ORF11850P | |
| 11855 | PerC family transcriptional regulator | |||
| 15090 | 145 aa hypothetical protein | |||
| 15095 | M | M.Sen21974ORF23385P (100% identity) | M.Eco086ORF15095P | |
| 15100 | 71 aa hypothetical protein | |||
| 15395 | phosphohydrolase | |||
| 15400 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco086DcmP |
| 15405 | V | V.SflC32DcmP (74% identity) | V.Eco086DcmP | |
| 15410 | drug/metabolite exporter YedA | |||
| 19135 | 108 aa hypothetical protein | |||
| 19150 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco086ORF19150P |
| 19155 | TrmB family transcriptional regulator | |||
| 21555 | XRE family transcriptional regulator | |||
| 21560 | M | M.KpnYN1ORFGP (89% identity) | M.Eco086ORF21560P | |
| 21565 | 71 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 27545 | 0 aa hypothetical protein | |||
| 27550 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco086ORF27550P |
| 27555 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 27790 | IS1 family transposase | |||
| 27795 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Eco086ORF27795P |
| 27800 | R | YpsR2ORFAP (100% identity) | CCWGG | Eco086ORF27795P |
| 27805 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1005 | IS3-like element ISEc52 family transposase | |||
| 1010 | R | EcoDFK1McrBBP (100% identity) | Eco086McrBP | |
| 1015 | R | EcosS9McrCP (100% identity) | Eco086McrCP | |
| 1020 | Alw26I/Eco31I/Esp3I family type II restriction | |||