Cronobacter sakazakii CS-09 |
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Putative Cronobacter sakazakii CS-09 RM systems
Ref: Cruz-Cordova,A. et al. unpublished
REBASE ref # 27467
| Sequence length: | GenBank #: | |
| Chromosome: | 4,496,886 bp | CP027109 |
| plasmid pCsaCS09b: | 105,136 bp | CP049262 |
REBASE acronym: CsaCS09
Org_num: 31073
All begin CsakCS09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15030 | integrase | |||
| 15035 | R | CsaCO4ORF13135P (100% identity) | CsaCS09ORF15035P | |
| 15040 | 312 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1065 | HNH endonuclease | |||
| 1075 | M | M.Eho40ORF3055P (100% identity) | CCGCGG | M.CsaCS09ORF1075P |
| 1080 | R | KpnJA29ORFEP (100% identity) | CCGCGG | CsaCS09ORF1075P |
| 1085 | recombinase family protein | |||
| 11600 | drug/metabolite exporter YedA | |||
| 11605 | V | V.Csacr8ORF5685P (100% identity) | V.CsaCS09ORF11610P | |
| ??? | M | M.Csacr8ORF5685P (100% identity) | CCWGG | M.CsaCS09ORF11610P |
| 11615 | phosphohydrolase | |||
| 14835 | pseudogene | |||
| 14840 | R | Csa96ORF8640P (72% identity) | CsaCS09ORF14845P | |
| 14845 | M | M.Csa96ORF8640P (87% identity) | M.CsaCS09ORF14845P | |
| 14850 | 88 aa hypothetical protein | |||
| 14985 | replication endonuclease | |||
| 14990 | M | M.Cpu601ORFCP (99% identity) | M.CsaCS09ORF14990P | |
| 14995 | DUF3850 domain-containing protein | |||
| 17345 | 376 aa hypothetical protein | |||
| 17350 | M | M.Cko582ORFAP (100% identity) | CTGAAG | M.CsaCS09ORF17350P |
| 17355 | conjugal transfer TraD family protein | |||
| 18375 | ribulose-phosphate 3-epimerase | |||
| 18380 | M | M.Csacsf1DamP (100% identity) | GATC | M.CsaCS09DamP |
| 18385 | cell division protein DamX | |||
| 20605 | 177 aa hypothetical protein | |||
| 20610 | M | M.SglORF828P (100% identity) | M.CsaCS09ORF20610P | |
| 20615 | 116 aa hypothetical protein | |||
| plasmid pCsaCS09b | ||||
| ??? | M | M.EspB1ORFCP (78% identity) | M.CsaCS09ORFAP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11705 | DUF4102 domain-containing protein | |||
| 11710 | M | M.KquCRE02ORF18330P (97% identity) | CGCATC | M.CsaCS09ORF11710P |
| 11715 | R | Pdi007ORF7025P (98% identity) | CGCATC | CsaCS09ORF11710P |
| 11720 | type IV pilin protein | |||