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Putative Ralstonia solanacearum SL3300 RM systems
Ref: Cho,H. et al. unpublished
REBASE ref # 27464
Sequence length: | GenBank #: | |
Chromosome: | 3,870,145 bp | CP022786 |
plasmid unnamed: | 2,033,766 bp | CP022787 |
REBASE acronym: Rso3300
Org_num: 31055
All begin CJO91_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
455 | Rrf2 family transcriptional regulator | |||
460 | M | M.RsoYQORF285P (100% identity) | M.Rso3300ORF460P | |
??? | R | RsoT78ORF205P (100% identity) | Rso3300ORF460P | |
475 | histidine kinase | |||
plasmid unnamed | ||||
20100 | 195 aa hypothetical protein | |||
20105 | R | AspI13ORF9120P (96% identity) | Rso3300ORF20120P | |
20110 | S | S.Rso2330ORF30P (48% identity) | S.Rso3300ORF20120P | |
20115 | 614 aa hypothetical protein | |||
20120 | M | M.Rso2330ORF30P (99% identity) | M.Rso3300ORF20120P | |
20125 | 61 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
30 | 97 aa hypothetical protein | |||
35 | RM | RsoT117ORF35P (100% identity) | Rso3300ORF35P | |
40 | 83 aa hypothetical protein | |||
1330 | 71 aa hypothetical protein | |||
??? | M | M1.RsoT42ORF1080P (100% identity) | M1.Rso3300ORF1340P | |
1345 | M | M2.RsoT42ORF1080P (100% identity) | M2.Rso3300ORF1340P | |
1350 | 121 aa hypothetical protein | |||
1850 | IS5/IS1182 family transposase | |||
1855 | M | M.RsoYQORF1280P (100% identity) | M.Rso3300ORF1855P | |
1860 | 1367 aa hypothetical protein | |||
6265 | 135 aa hypothetical protein | |||
6270 | M | M.RsoT78ORF1080P (100% identity) | M1.Rso3300ORF6270P | |
??? | M | M1.RsoT42ORF12755P (100% identity) | M2.Rso3300ORF6270P | |
6280 | type III secretion system effector protein | |||
6395 | IS5/IS1182 family transposase | |||
6400 | M | M.RsoYQORF1280P (100% identity) | M.Rso3300ORF6400P | |
6405 | 1367 aa hypothetical protein | |||
7855 | IS5/IS1182 family transposase | |||
7860 | M | M.RsoT60ORF11755P (100% identity) | M.Rso3300ORF7860P | |
7865 | Com family DNA-binding transcriptional | |||
10810 | 80 aa hypothetical protein | |||
10815 | M | M.RsoT78ORF8715P (100% identity) | M.Rso3300ORF10815P | |
10820 | 77 aa hypothetical protein | |||
12110 | tryptophan synthase subunit alpha | |||
12115 | M | M.Rsp647ORF10140P (100% identity) | GTWWAC | M.Rso3300ORF12115P |
12120 | tryptophan synthase subunit beta | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
350 | bifunctional (p)ppGpp | |||
355 | R | RsoYQMrrP (100% identity) | Rso3300MrrP | |
360 | 0 aa hypothetical protein |