Neisseria gonorrhoeae 980047-18 |
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Putative Neisseria gonorrhoeae 980047-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,209,742 bp
GenBank #: PTPH00000000 (NZ_PTPH00000000)
REBASE acronym: Ngo4718
Org_num: 30959
All begin C5B27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12195 | 0 aa hypothetical protein | |||
| 12200 | M | M.Ngos1291I (100% identity) | M.Ngo4718ORF12200P | |
| 12205 | ABC transporter | |||
| 1615 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1620 | R | Ngos1291ORF7750P (100% identity) | Ngo4718ORF1640P | |
| 1625 | sodium:proton exchanger | |||
| 1630 | S | S.NgoWNII (100% identity) | S.Ngo4718ORF1640P | |
| 1635 | DNA damage-inducible protein D | |||
| 1640 | M | M.Ngo4618ORF4480P (100% identity) | M.Ngo4718ORF1640P | |
| 1645 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 5845 | replication-associated recombination protein A | |||
| 5850 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo4718ORF5850P |
| 5855 | hydroxyacid dehydrogenase | |||
| 5860 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo4718ORF5850P |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12130 | replication initiation factor | |||
| 12135 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo4718ORF12145P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo4718ORF12145P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo4718ORF12145P | |
| 12155 | 48 aa hypothetical protein | |||
| 5730 | 3-isopropylmalate dehydrogenase | |||
| 5735 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo4718ORF5740P |
| 5740 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo4718ORF5740P |
| 5745 | 3-isopropylmalate dehydratase small subunit | |||
| 8675 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 8680 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo4718ORF8685P |
| 8685 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo4718ORF8685P |
| 8690 | anthranilate synthase component I | |||
| 11055 | excinuclease ABC subunit UvrA | |||
| 11060 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo4718ORF11065P |
| 11065 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo4718ORF11065P |
| 11070 | transposase | |||
| 3395 | GTPase ObgE | |||
| 3400 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo4718ORF3400P |
| 3405 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo4718ORF3400P |
| 3410 | cysteine--tRNA ligase | |||
| 5440 | ribosome-recycling factor | |||
| 5445 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo4718ORF5445P |
| 5450 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo4718ORF5445P |
| 5455 | group 2 glycosyl transferase | |||
| 5075 | 0 aa hypothetical protein | |||
| 5080 | M | M.NgoCT213ORF40P (85% identity) | M.Ngo4718ORF5080P | |
| 5085 | DNA adenine methylase | |||
| 4850 | 93 aa hypothetical protein | |||
| 4855 | R | Ngo4618ORF8225P (100% identity) | GGTGA | Ngo4718ORF4860P |
| 4860 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo4718ORF4860P |
| 4865 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo4718ORF4860P |
| 4870 | RNA-binding transcriptional accessory protein | |||
| 5085 | DNA adenine methylase | |||
| 5090 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo4718ORF5090P |
| 5095 | leucine--tRNA ligase | |||
| 275 | phenylalanine--tRNA ligase subunit alpha | |||
| 280 | V | V.NgoWSORF391P (100% identity) | V.Ngo4718ORF285P | |
| ??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo4718ORF285P | |
| 295 | R | NgoWSORF391P (100% identity) | Ngo4718ORF285P | |
| 300 | phenylalanine--tRNA ligase subunit beta | |||
| 590 | IS1595 family transposase | |||
| 595 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo4718ORF595P |
| 600 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo4718ORF595P |
| 605 | 0 aa hypothetical protein | |||
| 630 | uroporphyrinogen decarboxylase | |||
| ??? | H | H.Ngo4618ORF645P (100% identity) | H.Ngo4718ORF645P | |
| 640 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo4718ORF645P |
| 645 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo4718ORF645P |
| 650 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11665 | alpha-hydroxy-acid oxidizing protein | |||
| 11670 | R | Ngos1291ORF8930P (100% identity) | Ngo4718ORF11675P | |
| ??? | M | type III restriction endonuclease HindVIP subunit M | M.Ngo4718ORF11675P | |
| 8820 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 8825 | R | NgoWPIIP (100% identity) | CCACC | Ngo4718ORF8830P |
| 8830 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo4718ORF8830P |