Ref: Hirk,S. et al. unpublished

REBASE ref # 26993

Contig set: 2,209,742 bp

GenBank #: PTPH00000000 (NZ_PTPH00000000)

REBASE acronym: Ngo4718

Org_num: 30959

 

All begin C5B27_

Type I
ORF Gene Most similar Specificity Name
 
12195 0 aa hypothetical protein
12200 M M.Ngos1291ORF9245P (100% identity) M.Ngo4718ORF12200P
12205 ABC transporter
 
1615 ATP-dependent Clp protease ATP-binding subunit
1620 R Ngos1291ORF7750P (100% identity) Ngo4718ORF1640P
1625 sodium:proton exchanger
1630 S S.NgoWNII (100% identity) S.Ngo4718ORF1640P
1635 DNA damage-inducible protein D
1640 M M.Ngo4618ORF4480P (100% identity) M.Ngo4718ORF1640P
1645 ADP-L-glycero-D-mannoheptose-6-epimerase
 
5845 replication-associated recombination protein A
5850 R NgoWOIP (100% identity) GAGNNNNNTAC Ngo4718ORF5850P
5855 hydroxyacid dehydrogenase
5860 S S.Ngos1291ORF9245P (100% identity) GAGNNNNNTAC S.Ngo4718ORF5850P
Type II
ORF Gene Most similar Specificity Name
 
12130 replication initiation factor
12135 V very short patch repair endonuclease V.Ngo4718ORF12145P
??? R NgoTFGB2ORF1219P (100% identity) Ngo4718ORF12145P
??? M M.Ngos1291ORF65P (100% identity) M.Ngo4718ORF12145P
12155 48 aa hypothetical protein
 
5730 3-isopropylmalate dehydrogenase
5735 R Ngos1291ORF9120P (100% identity) GGNNCC Ngo4718ORF5740P
5740 M DNA (cytosine-5-)-methyltransferase GGNNCC M.Ngo4718ORF5740P
5745 3-isopropylmalate dehydratase small subunit
 
8675 5-(carboxyamino)imidazole ribonucleotide
8680 R NgoWSORF1056P (100% identity) GCCGGC Ngo4718ORF8685P
8685 M M.NgoWSORF1056P (100% identity) GCCGGC M.Ngo4718ORF8685P
8690 anthranilate synthase component I
 
11055 excinuclease ABC subunit UvrA
11060 R restriction endonuclease CCGCGG Ngo4718ORF11065P
11065 M DNA (cytosine-5-)-methyltransferase CCGCGG M.Ngo4718ORF11065P
11070 transposase
 
3395 GTPase ObgE
3400 M DNA cytosine methyltransferase RGCGCY M.Ngo4718ORF3400P
3405 R HaeII family restriction endonuclease RGCGCY Ngo4718ORF3400P
3410 cysteine--tRNA ligase
 
5440 ribosome-recycling factor
5445 M M.NgoSH240ORFKP (100% identity) GGCC M.Ngo4718ORF5445P
5450 R Ngos1291ORF3515P (100% identity) GGCC Ngo4718ORF5445P
5455 group 2 glycosyl transferase
 
5075 0 aa hypothetical protein
5080 M M.NgoCT213ORF40P (85% identity) M.Ngo4718ORF5080P
5085 DNA adenine methylase
 
4850 93 aa hypothetical protein
4855 R Ngo4618ORF8225P (100% identity) GGTGA Ngo4718ORF4860P
4860 M M1.NgoFQ35ORF11380P (100% identity) GGTGA M1.Ngo4718ORF4860P
4865 M M1.NgoWSIII (100% identity) GGTGA M2.Ngo4718ORF4860P
4870 RNA-binding transcriptional accessory protein
 
5085 DNA adenine methylase
5090 R restriction endonuclease GATC Ngo4718ORF5090P
5095 leucine--tRNA ligase
 
275 phenylalanine--tRNA ligase subunit alpha
280 V very short patch repair endonuclease V.Ngo4718ORF285P
??? M M.NgoTFGB2ORF299P (100% identity) M.Ngo4718ORF285P
295 R endonuclease Ngo4718ORF285P
300 phenylalanine--tRNA ligase subunit beta
 
590 IS1595 family transposase
595 RM SAM-dependent DNA methyltransferase GACNNNNNTGA Ngo4718ORF595P
600 S methyltransferase GACNNNNNTGA S.Ngo4718ORF595P
605 0 aa hypothetical protein
 
630 uroporphyrinogen decarboxylase
??? H DEAD/DEAH box helicase H.Ngo4718ORF645P
640 R restriction endonuclease GCSGC Ngo4718ORF645P
645 M DNA (cytosine-5-)-methyltransferase GCSGC M.Ngo4718ORF645P
650 103 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
11665 alpha-hydroxy-acid oxidizing protein
11670 R Ngos1291ORF8930P (100% identity) Ngo4718ORF11675P
??? M type III restriction endonuclease HindVIP subunit M M.Ngo4718ORF11675P
 
8820 tRNA 2-thiocytidine(32) synthetase TtcA
8825 R NgoWPIIP (100% identity) CCACC Ngo4718ORF8830P
8830 M type III restriction endonuclease subunit M CCACC M.Ngo4718ORF8830P