Neisseria gonorrhoeae 980046-18 |
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Putative Neisseria gonorrhoeae 980046-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,217,914 bp
GenBank #: PTPI00000000 (NZ_PTPI00000000)
REBASE acronym: Ngo4618
Org_num: 30957
All begin C5B38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4455 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4460 | R | Ngos1291ORF7750P (100% identity) | Ngo4618ORF4480P | |
| 4465 | sodium:proton exchanger | |||
| 4470 | S | S.NgoWNII (100% identity) | S.Ngo4618ORF4480P | |
| 4475 | DNA damage-inducible protein D | |||
| 4480 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo4618ORF4480P | |
| 4485 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 4075 | replication-associated recombination protein A | |||
| 4080 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo4618ORF4105P |
| 4085 | hydroxyacid dehydrogenase | |||
| 4090 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo4618ORF4105P |
| 4095 | 186 aa hypothetical protein | |||
| 4100 | 0 aa hypothetical protein | |||
| 4105 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.Ngo4618ORF4105P |
| 4110 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3960 | 3-isopropylmalate dehydrogenase | |||
| 3965 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo4618ORF3970P |
| 3970 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo4618ORF3970P |
| 3975 | 3-isopropylmalate dehydratase small subunit | |||
| 12565 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo4618ORF12575P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo4618ORF12575P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo4618ORF12575P | |
| 12585 | 48 aa hypothetical protein | |||
| 11865 | excinuclease ABC subunit UvrA | |||
| 11870 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo4618ORF11875P |
| 11875 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo4618ORF11875P |
| 11880 | transposase | |||
| 4820 | GTPase ObgE | |||
| 4825 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo4618ORF4825P |
| 4830 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo4618ORF4825P |
| 4835 | cysteine--tRNA ligase | |||
| 5225 | ribosome-recycling factor | |||
| 5230 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo4618ORF5230P |
| 5235 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo4618ORF5230P |
| 5240 | group 2 glycosyl transferase | |||
| 8215 | 93 aa hypothetical protein | |||
| 8220 | R | Ngo4718ORF4860P (100% identity) | GGTGA | Ngo4618ORF8225P |
| 8225 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo4618ORF8225P |
| 8230 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo4618ORF8225P |
| 8235 | RNA-binding transcriptional accessory protein | |||
| 275 | phenylalanine--tRNA ligase subunit alpha | |||
| 280 | V | V.NgoWSORF391P (100% identity) | V.Ngo4618ORF285P | |
| ??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo4618ORF285P | |
| 295 | R | NgoWSORF391P (100% identity) | Ngo4618ORF285P | |
| 300 | phenylalanine--tRNA ligase subunit beta | |||
| 1980 | leucine--tRNA ligase | |||
| 1985 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo4618ORF1985P |
| ??? | hypothetical protein | |||
| 1985 | restriction endonuclease | |||
| ??? | M | M.NgoCT213ORF40P (100% identity) | M.Ngo4618ORF1990P | |
| 2005 | 0 aa hypothetical protein | |||
| 3900 | anthranilate synthase component I | |||
| 3905 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo4618ORF3905P |
| 3910 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo4618ORF3905P |
| 3915 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 590 | IS1595 family transposase | |||
| 595 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo4618ORF595P |
| 600 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo4618ORF595P |
| 605 | 0 aa hypothetical protein | |||
| 630 | uroporphyrinogen decarboxylase | |||
| ??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo4618ORF645P | |
| 640 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo4618ORF645P |
| 645 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo4618ORF645P |
| 650 | 77 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11020 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 11025 | R | NgoWPIIP (100% identity) | CCACC | Ngo4618ORF11030P |
| 11030 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo4618ORF11030P |
| 7385 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo4318ORF5715P (100% identity) | M.Ngo4618ORF7390P | |
| 7400 | R | Ngos1291ORF8930P (100% identity) | Ngo4618ORF7390P | |
| 7405 | alpha-hydroxy-acid oxidizing protein | |||