Neisseria gonorrhoeae 980045-18 |
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Putative Neisseria gonorrhoeae 980045-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,210,712 bp
GenBank #: PTPJ00000000 (NZ_PTPJ00000000)
REBASE acronym: Ngo4518
Org_num: 30956
All begin C5B37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3105 | 186 aa hypothetical protein | |||
| 3110 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo4518ORF3110P |
| 3115 | hydroxyacid dehydrogenase | |||
| 3120 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo4518ORF3110P |
| 3125 | replication-associated recombination protein A | |||
| 12485 | ABC transporter | |||
| 12490 | M | M.Ngos1291I (100% identity) | M.Ngo4518ORF12490P | |
| 12495 | 0 aa hypothetical protein | |||
| 4410 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4415 | R | Ngos1291ORF7750P (100% identity) | Ngo4518ORF4435P | |
| 4420 | sodium:proton exchanger | |||
| 4425 | S | S.NgoWNII (100% identity) | S.Ngo4518ORF4435P | |
| 4430 | DNA damage-inducible protein D | |||
| 4435 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo4518ORF4435P | |
| 4440 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12410 | replication initiation factor | |||
| 12415 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo4518ORF12425P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo4518ORF12425P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo4518ORF12425P | |
| 12435 | 48 aa hypothetical protein | |||
| 40 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 45 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo4518ORF50P |
| 50 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo4518ORF50P |
| 55 | anthranilate synthase component I | |||
| 11650 | excinuclease ABC subunit UvrA | |||
| 11655 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo4518ORF11660P |
| 11660 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo4518ORF11660P |
| 11665 | transposase | |||
| 9120 | group 2 glycosyl transferase | |||
| 9125 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo4518ORF9130P |
| 9130 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo4518ORF9130P |
| 9135 | ribosome-recycling factor | |||
| 1655 | GTPase ObgE | |||
| 1660 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo4518ORF1660P |
| 1665 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo4518ORF1660P |
| 1670 | cysteine--tRNA ligase | |||
| 7615 | 93 aa hypothetical protein | |||
| 7620 | R | Ngo4718ORF4860P (100% identity) | GGTGA | Ngo4518ORF7625P |
| 7625 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo4518ORF7625P |
| 7630 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo4518ORF7625P |
| 7635 | RNA-binding transcriptional accessory protein | |||
| 3225 | 3-isopropylmalate dehydratase small subunit | |||
| 3230 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo4518ORF3230P |
| 3235 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo4518ORF3230P |
| 3240 | 3-isopropylmalate dehydrogenase | |||
| 1170 | phenylalanine--tRNA ligase subunit alpha | |||
| 1175 | V | V.NgoWSORF391P (100% identity) | V.Ngo4518ORF1180P | |
| ??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo4518ORF1180P | |
| 1190 | R | NgoWSORF391P (100% identity) | Ngo4518ORF1180P | |
| 1195 | phenylalanine--tRNA ligase subunit beta | |||
| 2910 | leucine--tRNA ligase | |||
| ??? | R | Ngo4318ORF7500P (100% identity) | GATC | Ngo4518ORF2915P |
| 2925 | site-specific DNA-methyltransferase | |||
| ??? | hypothetical protein | |||
| 2925 | M | site-specific DNA-methyltransferase | M.Ngo4518ORF2925P | |
| 2935 | 0 aa hypothetical protein | |||
| 1485 | IS1595 family transposase | |||
| 1490 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo4518ORF1490P |
| 1495 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo4518ORF1490P |
| 1500 | 0 aa hypothetical protein | |||
| 1525 | uroporphyrinogen decarboxylase | |||
| ??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo4518ORF1540P | |
| 1535 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo4518ORF1540P |
| 1540 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo4518ORF1540P |
| 1545 | 60 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10700 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo4518ORF10700P |
| 10705 | R | NgoWPIIP (100% identity) | CCACC | Ngo4518ORF10700P |
| 10710 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 6775 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo3918ORF2345P (100% identity) | M.Ngo4518ORF6780P | |
| 6790 | R | Ngos1291ORF8930P (100% identity) | Ngo4518ORF6780P | |
| 6795 | alpha-hydroxy-acid oxidizing protein | |||