Neisseria gonorrhoeae 980044-18 |
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Putative Neisseria gonorrhoeae 980044-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,214,035 bp
GenBank #: PTPK00000000 (NZ_PTPK00000000)
REBASE acronym: Ngo4418
Org_num: 30961
All begin C5B34_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4940 | ATP-dependent Clp protease ATP-binding subunit | |||
| 4945 | R | Ngos1291ORF7750P (100% identity) | Ngo4418ORF4965P | |
| 4950 | sodium:proton exchanger | |||
| 4955 | S | S.NgoWNII (100% identity) | S.Ngo4418ORF4965P | |
| 4960 | DNA damage-inducible protein D | |||
| 4965 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo4418ORF4965P | |
| 4970 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| 8880 | replication-associated recombination protein A | |||
| 8885 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo4418ORF8910P |
| 8890 | hydroxyacid dehydrogenase | |||
| 8895 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo4418ORF8910P |
| 8900 | 186 aa hypothetical protein | |||
| 8905 | 0 aa hypothetical protein | |||
| 8910 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.Ngo4418ORF8910P |
| 8915 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12440 | replication initiation factor | |||
| 12445 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo4418ORF12455P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo4418ORF12455P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo4418ORF12455P | |
| 12465 | 48 aa hypothetical protein | |||
| 8765 | 3-isopropylmalate dehydrogenase | |||
| 8770 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo4418ORF8775P |
| 8775 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo4418ORF8775P |
| 8780 | 3-isopropylmalate dehydratase small subunit | |||
| 11670 | excinuclease ABC subunit UvrA | |||
| 11675 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo4418ORF11680P |
| 11680 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo4418ORF11680P |
| 11685 | transposase | |||
| 2180 | GTPase ObgE | |||
| 2185 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo4418ORF2185P |
| 2190 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo4418ORF2185P |
| 2195 | cysteine--tRNA ligase | |||
| 8270 | 93 aa hypothetical protein | |||
| 8275 | R | Ngo4718ORF4860P (100% identity) | GGTGA | Ngo4418ORF8280P |
| 8280 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo4418ORF8280P |
| 8285 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo4418ORF8280P |
| 8290 | RNA-binding transcriptional accessory protein | |||
| 270 | phenylalanine--tRNA ligase subunit alpha | |||
| 275 | V | V.NgoWSORF391P (100% identity) | V.Ngo4418ORF280P | |
| ??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo4418ORF280P | |
| 290 | R | NgoWSORF391P (100% identity) | Ngo4418ORF280P | |
| 295 | phenylalanine--tRNA ligase subunit beta | |||
| 3465 | leucine--tRNA ligase | |||
| 3470 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo4418ORF3470P |
| 3475 | DNA adenine methylase | |||
| 3475 | DNA adenine methylase | |||
| ??? | M | M.NgoCT213ORF40P (85% identity) | M.Ngo4418ORF3480P | |
| 3490 | 0 aa hypothetical protein | |||
| 4450 | ribosome-recycling factor | |||
| 4455 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo4418ORF4455P |
| 4460 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo4418ORF4455P |
| 4465 | group 2 glycosyl transferase | |||
| 3100 | anthranilate synthase component I | |||
| 3105 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo4418ORF3105P |
| 3110 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo4418ORF3105P |
| 3115 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 585 | IS1595 family transposase | |||
| 590 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo4418ORF590P |
| 595 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo4418ORF590P |
| 600 | 0 aa hypothetical protein | |||
| 625 | uroporphyrinogen decarboxylase | |||
| ??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo4418ORF640P | |
| 635 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo4418ORF640P |
| 640 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo4418ORF640P |
| 645 | 60 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10560 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo4418ORF10560P |
| 10565 | R | NgoWPIIP (100% identity) | CCACC | Ngo4418ORF10560P |
| 10570 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 7440 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.NgoWSORF749P (99% identity) | M.Ngo4418ORF7445P | |
| 7455 | R | Ngos1291ORF8930P (100% identity) | Ngo4418ORF7445P | |
| 7460 | alpha-hydroxy-acid oxidizing protein | |||