Ref: Hirk,S. et al. unpublished

REBASE ref # 26993

Contig set: 2,217,312 bp

GenBank #: PTPL00000000 (NZ_PTPL00000000)

REBASE acronym: Ngo4318

Org_num: 30958

 

All begin C5B33_

Type I
ORF Gene Most similar Specificity Name
 
3460 ABC transporter
3465 M M.Ngos1291I (100% identity) GAGNNNNNTAC M.Ngo4318ORF3465P
3470 0 aa hypothetical protein
3475 186 aa hypothetical protein
3480 S S.Ngos1291I (100% identity) GAGNNNNNTAC S.Ngo4318ORF3465P
3485 hydroxyacid dehydrogenase
3490 R NgoWOIP (100% identity) GAGNNNNNTAC Ngo4318ORF3465P
3495 replication-associated recombination protein A
 
3190 ATP-dependent Clp protease ATP-binding subunit
3195 R Ngos1291ORF7750P (100% identity) Ngo4318ORF3215P
3200 sodium:proton exchanger
3205 S S.NgoWNII (100% identity) S.Ngo4318ORF3215P
3210 DNA damage-inducible protein D
3215 M M.Ngo4718ORF1640P (100% identity) M.Ngo4318ORF3215P
3220 ADP-L-glycero-D-mannoheptose-6-epimerase
Type II
ORF Gene Most similar Specificity Name
 
12430 replication initiation factor
12435 V V.Ngos1291ORF65P (100% identity) V.Ngo4318ORF12445P
??? R NgoTFGB2ORF1219P (100% identity) Ngo4318ORF12445P
??? M M.NgoWSORF1801P (100% identity) M.Ngo4318ORF12445P
12455 48 aa hypothetical protein
 
1770 5-(carboxyamino)imidazole ribonucleotide
1775 R Ngos1291ORF10080P (100% identity) GCCGGC Ngo4318ORF1780P
1780 M M.Ngos1291ORF10080P (100% identity) GCCGGC M.Ngo4318ORF1780P
1785 anthranilate synthase component I
 
11760 excinuclease ABC subunit UvrA
11765 R Ngos1291ORF260P (100% identity) CCGCGG Ngo4318ORF11770P
11770 M M.Ngos1291ORF260P (100% identity) CCGCGG M.Ngo4318ORF11770P
11775 transposase
 
7495 leucine--tRNA ligase
??? R Ngo4518ORF2915P (100% identity) GATC Ngo4318ORF7500P
7510 site-specific DNA-methyltransferase
 
??? hypothetical protein
7510 M site-specific DNA-methyltransferase M.Ngo4318ORF7510P
7520 0 aa hypothetical protein
 
8740 group 2 glycosyl transferase
8745 R Ngos1291ORF3515P (100% identity) GGCC Ngo4318ORF8750P
8750 M M.NgoSH240ORFKP (100% identity) GGCC M.Ngo4318ORF8750P
8755 ribosome-recycling factor
 
6965 93 aa hypothetical protein
??? R Ngo4218ORF7825P (100% identity) GGTGA Ngo4318ORF6975P
6975 M M1.NgoFQ35ORF11380P (100% identity) GGTGA M1.Ngo4318ORF6975P
6980 M M1.NgoWSIII (100% identity) GGTGA M2.Ngo4318ORF6975P
6985 RNA-binding transcriptional accessory protein
 
5405 cysteine--tRNA ligase
5410 R Ngos1291ORF4640P (100% identity) RGCGCY Ngo4318ORF5415P
5415 M M.Ngos1291ORF4640P (100% identity) RGCGCY M.Ngo4318ORF5415P
5420 GTPase ObgE
 
3595 3-isopropylmalate dehydratase small subunit
3600 M M.NmeMBW2ORFJP (100% identity) GGNNCC M.Ngo4318ORF3600P
3605 R Ngos1291ORF9120P (100% identity) GGNNCC Ngo4318ORF3600P
3610 3-isopropylmalate dehydrogenase
 
280 phenylalanine--tRNA ligase subunit alpha
285 V V.NgoWSORF391P (100% identity) V.Ngo4318ORF290P
??? M M.NgoTFGB2ORF299P (100% identity) M.Ngo4318ORF290P
300 R NgoWSORF391P (100% identity) Ngo4318ORF290P
305 phenylalanine--tRNA ligase subunit beta
 
595 IS1595 family transposase
600 RM Ngos1291ORF7515P (100% identity) GACNNNNNTGA Ngo4318ORF600P
605 S S.NgoWSORF450P (100% identity) GACNNNNNTGA S.Ngo4318ORF600P
610 0 aa hypothetical protein
 
635 uroporphyrinogen decarboxylase
??? H H.Ngo4718ORF645P (100% identity) H.Ngo4318ORF650P
645 R Ngos1291ORF7560P (100% identity) GCSGC Ngo4318ORF650P
650 M M.Ngos1291ORF7560P (100% identity) GCSGC M.Ngo4318ORF650P
655 60 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
5710 tRNA pseudouridine(55) synthase TruB
??? M M.Ngo4218ORF6990P (100% identity) M.Ngo4318ORF5715P
5725 R Ngos1291ORF8930P (100% identity) Ngo4318ORF5715P
5730 alpha-hydroxy-acid oxidizing protein
 
6010 tRNA 2-thiocytidine(32) synthetase TtcA
6015 R NgoWPIIP (100% identity) CCACC Ngo4318ORF6020P
6020 M M.Ngos1291ORF8455P (100% identity) CCACC M.Ngo4318ORF6020P
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