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Putative Neisseria gonorrhoeae 980043-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,217,312 bp
GenBank #: PTPL00000000 (NZ_PTPL00000000)
REBASE acronym: Ngo4318
Org_num: 30958
All begin C5B33_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3460 | ABC transporter | |||
3465 | M | M.Ngos1291I (100% identity) | GAGNNNNNTAC | M.Ngo4318ORF3465P |
3470 | 0 aa hypothetical protein | |||
3475 | 186 aa hypothetical protein | |||
3480 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo4318ORF3465P |
3485 | hydroxyacid dehydrogenase | |||
3490 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo4318ORF3465P |
3495 | replication-associated recombination protein A | |||
3190 | ATP-dependent Clp protease ATP-binding subunit | |||
3195 | R | Ngos1291ORF7750P (100% identity) | Ngo4318ORF3215P | |
3200 | sodium:proton exchanger | |||
3205 | S | S.NgoWNII (100% identity) | S.Ngo4318ORF3215P | |
3210 | DNA damage-inducible protein D | |||
3215 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo4318ORF3215P | |
3220 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
12430 | replication initiation factor | |||
12435 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo4318ORF12445P | |
??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo4318ORF12445P | |
??? | M | M.NgoWSORF1801P (100% identity) | M.Ngo4318ORF12445P | |
12455 | 48 aa hypothetical protein | |||
1770 | 5-(carboxyamino)imidazole ribonucleotide | |||
1775 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo4318ORF1780P |
1780 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo4318ORF1780P |
1785 | anthranilate synthase component I | |||
11760 | excinuclease ABC subunit UvrA | |||
11765 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo4318ORF11770P |
11770 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo4318ORF11770P |
11775 | transposase | |||
7495 | leucine--tRNA ligase | |||
??? | R | Ngo4518ORF2915P (100% identity) | GATC | Ngo4318ORF7500P |
7510 | site-specific DNA-methyltransferase | |||
??? | hypothetical protein | |||
7510 | M | site-specific DNA-methyltransferase | M.Ngo4318ORF7510P | |
7520 | 0 aa hypothetical protein | |||
8740 | group 2 glycosyl transferase | |||
8745 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo4318ORF8750P |
8750 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo4318ORF8750P |
8755 | ribosome-recycling factor | |||
6965 | 93 aa hypothetical protein | |||
??? | R | Ngo4218ORF7825P (100% identity) | GGTGA | Ngo4318ORF6975P |
6975 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M1.Ngo4318ORF6975P |
6980 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo4318ORF6975P |
6985 | RNA-binding transcriptional accessory protein | |||
5405 | cysteine--tRNA ligase | |||
5410 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo4318ORF5415P |
5415 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo4318ORF5415P |
5420 | GTPase ObgE | |||
3595 | 3-isopropylmalate dehydratase small subunit | |||
3600 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo4318ORF3600P |
3605 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo4318ORF3600P |
3610 | 3-isopropylmalate dehydrogenase | |||
280 | phenylalanine--tRNA ligase subunit alpha | |||
285 | V | V.NgoWSORF391P (100% identity) | V.Ngo4318ORF290P | |
??? | M | M.NgoTFGB2ORF299P (100% identity) | M.Ngo4318ORF290P | |
300 | R | NgoWSORF391P (100% identity) | Ngo4318ORF290P | |
305 | phenylalanine--tRNA ligase subunit beta | |||
595 | IS1595 family transposase | |||
600 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo4318ORF600P |
605 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo4318ORF600P |
610 | 0 aa hypothetical protein | |||
635 | uroporphyrinogen decarboxylase | |||
??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo4318ORF650P | |
645 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo4318ORF650P |
650 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo4318ORF650P |
655 | 60 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5710 | tRNA pseudouridine(55) synthase TruB | |||
??? | M | M.Ngo4218ORF6990P (100% identity) | M.Ngo4318ORF5715P | |
5725 | R | Ngos1291ORF8930P (100% identity) | Ngo4318ORF5715P | |
5730 | alpha-hydroxy-acid oxidizing protein | |||
6010 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
6015 | R | NgoWPIIP (100% identity) | CCACC | Ngo4318ORF6020P |
6020 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo4318ORF6020P |